Factsheet for Bra029881.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08562	Canola	plastid	99.65	99.65
AT3G10940.1	Thale cress	plastid	81.12	82.27
PGSC0003DMT400074765	Potato	cytosol	61.54	81.86
Solyc06g050230.2.1	Tomato	cytosol	46.15	68.39
VIT_13s0067g02510.t01	Wine grape	plastid	65.38	66.08
Os12t0112500-01	Rice	plasma membrane, plastid	61.89	65.31
Os11t0113100-01	Rice	plasma membrane, plastid	61.54	64.94
KRH53770	Soybean	plastid	65.73	63.95
Zm00001d044693_P001	Maize	plastid	60.84	62.14
EES15654	Sorghum	plastid	60.84	62.14
TraesCS5D01G144600.1	Wheat	plastid	59.44	60.28
TraesCS5B01G146700.1	Wheat	plastid	58.74	59.57
HORVU5Hr1G046860.1	Barley	plastid	58.39	59.22
TraesCS5A01G148200.1	Wheat	plastid	58.39	59.22
KRH64175	Soybean	cytosol	63.29	58.77
GSMUA_Achr4P00220_001	Banana	plastid	27.62	44.38
Bra006908.1-P	Field mustard	plastid	31.12	25.21
Bra033449.1-P	Field mustard	cytosol	33.92	17.57
Os03t0107800-01	Rice	cytosol, nucleus	1.05	4.76

Protein Annotations

MapMan:18.4.23.2.3	MapMan:3.2.3.2.2	Gene3D:3.90.190.10	EnsemblPlantsGene:Bra029881	EnsemblPlants:Bra029881.1	EnsemblPlants:Bra029881.1-P
InterPro:DUSP	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005983	GO:GO:0006464
GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0016791	GO:GO:0019203
GO:GO:0019538	GO:GO:0030246	GO:GO:0046838	GO:GO:0050308	GO:GO:2001070	InterPro:IPR000387
InterPro:IPR020422	InterPro:IPR029021	UniProt:M4EM61	PFAM:PF00782	PFscan:PS50054	PFscan:PS50056
PANTHER:PTHR10159	PANTHER:PTHR10159:SF494	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	InterPro:TYR_PHOSPHATASE_DUAL_dom
InterPro:TYR_PHOSPHATASE_dom	UniParc:UPI0002547844	:	:	:	:

Description

AT3G10940 (E=4e-144) | protein phosphatase-related

Coordinates

chrA05:+:21883954..21885251

Molecular Weight (calculated)

32419.5 Da

IEP (calculated)

8.911

GRAVY (calculated)

-0.678

Length

286 amino acids

Sequence
(BLAST)

001: MSFAGSKSCI FSLTNHYKEN DKSFRLNSIN KPSIDPKRFP RNLGVSCKIS GSNGAEENPG TNGVSLSSKN KMEDYNTAMK RLMRSPYEYH HDLGMNYTLI
101: RDELIVGSQP QKPGDIDHLK KEENVAYILN LQQDKDVEYW GIDLDSIVKR CKELGIRHMR RPAKDFDPLS LRSQLPKAVS SLEWAVSEGK GRVYVHCTAG
201: LGRAPAVSIA YMYWFCGMNL NTAYDAFVSK RPCGPNKGAI RGATYDLAKN DPWKEPFENL PENAFEDIAD WERKLIQERV RANRGT

Best Arabidopsis Sequence Match ( AT3G10940.1 )
(BLAST)

001: MSVIGSKSCI FSVARYTREN EKSSCFTSIN KKSSLDLRFP RNLAGVSCKF SGENPGTNGV SLSSKNKMED YNTAMKRLMR SPYEYHHDLG MNYTLIRDEL
101: IVGSQPQKPE DIDHLKQEQN VAYILNLQQD KDIEYWGIDL DSIVRRCKEL GIRHMRRPAK DFDPLSLRSQ LPKAVSSLEW AVSEGKGRVY VHCSAGLGRA
201: PGVSIAYMYW FCDMNLNTAY DTLVSKRPCG PNKGAIRGAT YDLAKNDPWK EPFESLPENA FEDIADWERK LIQERVRALR GT

Arabidopsis Description

LSF2Phosphoglucan phosphatase LSF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SRK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.