Factsheet for Bra033449.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra025379.1-P
Bra033088.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52180.1	Bra025379.1-P	AT3G29160.1	12148529
AT3G52180.1	Bra033088.1-P	AT3G29160.1	12148529

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23194	Canola	cytosol, plastid	57.07	83.55
Bra006908.1-P	Field mustard	plastid	49.64	77.62
AT3G52180.1	Thale cress	plastid	52.9	77.04
KRH34699	Soybean	nucleus	40.58	60.38
KRG92090	Soybean	plastid	40.22	59.84
Solyc11g007830.1.1	Tomato	plastid	39.86	59.46
Solyc03g111160.2.1	Tomato	mitochondrion, plastid	40.04	59.41
PGSC0003DMT400039423	Potato	mitochondrion, plastid	39.86	59.14
PGSC0003DMT400070294	Potato	plastid	39.49	58.92
VIT_00s0250g00020.t01	Wine grape	mitochondrion	40.22	58.73
KXG40392	Sorghum	plastid	37.68	55.76
TraesCS4D01G353800.1	Wheat	plastid	36.41	54.47
TraesCS4B01G360800.2	Wheat	plastid	36.23	54.2
TraesCS5A01G529100.1	Wheat	plastid	35.69	53.39
Zm00001d027309_P007	Maize	plastid	37.14	52.43
HORVU4Hr1G086650.11	Barley	plastid	36.41	51.41
GSMUA_Achr8P14150_001	Banana	cytosol, golgi, mitochondrion, plastid	37.14	49.16
Bra029881.1-P	Field mustard	plastid	17.57	33.92

Protein Annotations

Gene3D:2.130.10.10	Gene3D:2.60.40.10	MapMan:3.2.3.2.1	Gene3D:3.90.190.10	InterPro:AMPK1_CBM	EnsemblPlantsGene:Bra033449
EnsemblPlants:Bra033449.1	EnsemblPlants:Bra033449.1-P	InterPro:DSP4	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005975	GO:GO:0005982	GO:GO:0006464	GO:GO:0006470
GO:GO:0007623	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0016791	GO:GO:0019203	GO:GO:0019538	InterPro:IPR000387	InterPro:IPR001680
InterPro:IPR013783	InterPro:IPR015943	InterPro:IPR017986	InterPro:IPR020422	InterPro:IPR029021	InterPro:Ig-like_fold
InterPro:Ig_E-set	UniProt:M4EXB2	PFAM:PF00400	PFAM:PF00782	PFAM:PF16561	PFscan:PS50054
PFscan:PS50056	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR10343	PANTHER:PTHR10343:SF58	InterPro:Prot-tyrosine_phosphatase-like
SMART:SM00195	SMART:SM00320	SUPFAM:SSF50978	SUPFAM:SSF52799	SUPFAM:SSF81296	InterPro:TYR_PHOSPHATASE_DUAL_dom
InterPro:TYR_PHOSPHATASE_dom	UniParc:UPI0002543854	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

AT3G52180 (E=2e-165) ATPTPKIS1, DSP4, SEX4 | SEX4 (STARCH-EXCESS 4); polysaccharide binding / protein tyrosine/serine/threonine phosphatase

Coordinates

chrA04:+:4275049..4281127

Molecular Weight (calculated)

60956.6 Da

IEP (calculated)

5.131

GRAVY (calculated)

-0.282

Length

552 amino acids

Sequence
(BLAST)

001: METEEASRGE SGYVVCGSWI RRPKKVNWAI IAKAAKRRGS SSPPLLNIYS FDPITTSLSS SPLSTHALNE SDGDPVAISV HPGGDYFVCS TSKGGCKLFE
101: IAGGATTGIT ILEKELPPLQ NAGLQKCMAF SFDGSKLAVG GVDGCLRIMD WPNLSVILEE PKAHKSIRDM DFSLDSEFLA TTSTDGSARI WKAEDGFPLS
201: TLERSGLPIK ANDLKLRLVL QAVSDSKSTS AEVSGVSNKE EEEKSDEYSQ DMTQAMGAVL TYRHELGMNY SFVRPDLIVG SCLQTPEDID KLRKIGVKTI
301: FCLQQDPDLE YFGVDISSIQ AYAKTFTDIQ HIRCQIRDFD AFDLRLRLPA VVSTLYKAVK RNGGVTYVHC TAGMGRAPAV ALTYMFWVQG YKLMEAHKLL
401: MSKRTCSPNL DAIRNATIDI LTGLKKKIVT LTLKDKGFST VEVSGLDIGW GQRIPLTLDK GTGLWSLDRE LPEGQFEYKY IIDGEWTHNE LEPFTGPNKD
501: GHTNNYVKVV DDPTSVDGAT RERLSSEDPE LLEEERLKLI QFLETCSEQP QV

Best Arabidopsis Sequence Match ( AT3G52180.1 )
(BLAST)

001: MNCLQNLPRC SVSPLLGFGC IQRDHSSSSS SLKMLISPPI KANDPKSRLV LHAVSESKSS SEMSGVAKDE EKSDEYSQDM TQAMGAVLTY RHELGMNYNF
101: IRPDLIVGSC LQTPEDVDKL RKIGVKTIFC LQQDPDLEYF GVDISSIQAY AKKYSDIQHI RCEIRDFDAF DLRMRLPAVV GTLYKAVKRN GGVTYVHCTA
201: GMGRAPAVAL TYMFWVQGYK LMEAHKLLMS KRSCFPKLDA IRNATIDILT GLKRKTVTLT LKDKGFSRVE ISGLDIGWGQ RIPLTLDKGT GFWILKRELP
301: EGQFEYKYII DGEWTHNEAE PFIGPNKDGH TNNYAKVVDD PTSVDGTTRE RLSSEDPELL EEERSKLIQF LETCSEAEV

Arabidopsis Description

DSP4SEX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.