Factsheet for HORVU4Hr1G086650.11

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G081310.4
HORVU3Hr1G069190.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52180.1	HORVU1Hr1G081310.4	AT3G29160.1	12148529
AT3G52180.1	HORVU3Hr1G069190.1	AT3G29160.1	12148529

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G529100.1	Wheat	plastid	89.51	94.85
TraesCS4D01G353800.1	Wheat	plastid	89.26	94.58
TraesCS4B01G360800.2	Wheat	plastid	89.26	94.58
KXG40392	Sorghum	plastid	76.98	80.7
Zm00001d027309_P007	Maize	plastid	77.24	77.24
KRG92090	Soybean	plastid	57.8	60.92
KRH34699	Soybean	nucleus	57.29	60.38
CDY72539	Canola	cytosol	37.08	58.47
VIT_00s0250g00020.t01	Wine grape	mitochondrion	54.99	56.88
Solyc11g007830.1.1	Tomato	plastid	52.94	55.95
Bra006908.1-P	Field mustard	plastid	49.62	54.96
PGSC0003DMT400039423	Potato	mitochondrion, plastid	52.17	54.84
Solyc03g111160.2.1	Tomato	mitochondrion, plastid	52.17	54.84
CDY23194	Canola	cytosol, plastid	52.69	54.64
CDX78070	Canola	mitochondrion, plastid	52.69	54.64
CDX73654	Canola	mitochondrion, plastid	52.69	54.64
AT3G52180.1	Thale cress	plastid	52.69	54.35
PGSC0003DMT400070294	Potato	plastid	51.41	54.32
GSMUA_Achr8P14150_001	Banana	cytosol, golgi, mitochondrion, plastid	57.29	53.72
Bra033449.1-P	Field mustard	cytosol	51.41	36.41
HORVU5Hr1G046860.1	Barley	plastid	23.79	32.98
HORVU1Hr1G093880.2	Barley	plastid	21.48	13.35

Protein Annotations

Gene3D:2.60.40.10	MapMan:3.2.3.2.1	Gene3D:3.90.190.10	UniProt:A0A287PZR9	InterPro:AMPK1_CBM	InterPro:DSP4
InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005982	GO:GO:0005983	GO:GO:0006464
GO:GO:0006470	GO:GO:0007623	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787
GO:GO:0016791	GO:GO:0019203	GO:GO:0019538	GO:GO:0030246	GO:GO:0030247	GO:GO:2001066
EnsemblPlantsGene:HORVU4Hr1G086650	EnsemblPlants:HORVU4Hr1G086650.11	InterPro:IPR000387	InterPro:IPR013783	InterPro:IPR020422	InterPro:IPR029021
InterPro:Ig-like_fold	InterPro:Ig_E-set	PFAM:PF00782	PFAM:PF16561	PFscan:PS50056	PANTHER:PTHR10343
PANTHER:PTHR10343:SF58	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	SUPFAM:SSF81296	InterPro:TYR_PHOSPHATASE_DUAL_dom
InterPro:TYR_PHOSPHATASE_dom	UniParc:UPI000B48389F	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:634777170..634781935

Molecular Weight (calculated)

43856.1 Da

IEP (calculated)

6.406

GRAVY (calculated)

-0.473

Length

391 amino acids

Sequence
(BLAST)

001: PGPFDFSPES CFAAVSRPRS LADFSRPPPA REPPILAGSR SMRRPSPLNL AMVRGGSRRS NTVKTASGAS TSSAESSAME PGAEKSDTYS TNMTQAMGAV
101: LTYRHELGMN YNFICPDLIV GSCLQSPRDV DKLREIGVKT VFCLQQDPDL EYFGVDIRAI QDYCLECKDI EHCREEVRDF DAFDLRLRLP AVISKLYKLA
201: SHNGGITYIH CTAGLGRAPA VALAYMFWIL GYNLNEGHQL LQSKRPSFPK LEAIKLATAD ILTGLSKNCI TLKWKNGSCS SVEISGLDIG WGQKIPLAYD
301: NEKRAWFLER ELPEGRYEYK YVVDGNWVCN EHEMKTKPNA DGHVNNYIQV ARDGTSDEEK AMRERLTGPN PELTKEERLM IKEYLEQYTE Q

Best Arabidopsis Sequence Match ( AT3G52180.1 )
(BLAST)

001: MNCLQNLPRC SVSPLLGFGC IQRDHSSSSS SLKMLISPPI KANDPKSRLV LHAVSESKSS SEMSGVAKDE EKSDEYSQDM TQAMGAVLTY RHELGMNYNF
101: IRPDLIVGSC LQTPEDVDKL RKIGVKTIFC LQQDPDLEYF GVDISSIQAY AKKYSDIQHI RCEIRDFDAF DLRMRLPAVV GTLYKAVKRN GGVTYVHCTA
201: GMGRAPAVAL TYMFWVQGYK LMEAHKLLMS KRSCFPKLDA IRNATIDILT GLKRKTVTLT LKDKGFSRVE ISGLDIGWGQ RIPLTLDKGT GFWILKRELP
301: EGQFEYKYII DGEWTHNEAE PFIGPNKDGH TNNYAKVVDD PTSVDGTTRE RLSSEDPELL EEERSKLIQF LETCSEAEV

Arabidopsis Description

DSP4SEX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.