Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G52180.1 | CDX85250 | AT3G29160.1 | 12148529 |
| AT3G52180.1 | CDX86386 | AT3G29160.1 | 12148529 |
| AT3G52180.1 | CDY04058 | AT3G29160.1 | 12148529 |
| AT3G52180.1 | CDY44405 | AT3G29160.1 | 12148529 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006908.1-P | Field mustard | plastid | 97.18 | 68.27 |
| CDX78070 | Canola | mitochondrion, plastid | 97.98 | 64.46 |
| CDX73654 | Canola | mitochondrion, plastid | 94.76 | 62.33 |
| AT3G52180.1 | Thale cress | plastid | 89.52 | 58.58 |
| CDY23194 | Canola | cytosol, plastid | 88.71 | 58.36 |
| KRH34699 | Soybean | nucleus | 66.13 | 44.2 |
| KRG92090 | Soybean | plastid | 65.32 | 43.67 |
| Solyc11g007830.1.1 | Tomato | plastid | 63.71 | 42.7 |
| VIT_00s0250g00020.t01 | Wine grape | mitochondrion | 64.52 | 42.33 |
| PGSC0003DMT400070294 | Potato | plastid | 62.9 | 42.16 |
| Solyc03g111160.2.1 | Tomato | mitochondrion, plastid | 61.69 | 41.13 |
| PGSC0003DMT400039423 | Potato | mitochondrion, plastid | 61.29 | 40.86 |
| KXG40392 | Sorghum | plastid | 61.29 | 40.75 |
| TraesCS4B01G360800.2 | Wheat | plastid | 58.47 | 39.3 |
| TraesCS4D01G353800.1 | Wheat | plastid | 58.06 | 39.02 |
| TraesCS5A01G529100.1 | Wheat | plastid | 57.66 | 38.75 |
| Zm00001d027309_P007 | Maize | plastid | 60.48 | 38.36 |
| HORVU4Hr1G086650.11 | Barley | plastid | 58.47 | 37.08 |
| GSMUA_Achr8P14150_001 | Banana | cytosol, golgi, mitochondrion, plastid | 58.87 | 35.01 |
| CDY66368 | Canola | plastid | 23.79 | 20.63 |
| CDY08562 | Canola | plastid | 23.79 | 20.63 |
| CDY00979 | Canola | plastid | 23.79 | 20.63 |
| CDX74300 | Canola | cytosol | 7.66 | 19.79 |
| CDX74302 | Canola | plastid | 25.4 | 10.98 |
| CDX91945 | Canola | plastid | 25.4 | 10.86 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:3.2.3.2.1 | Gene3D:3.90.190.10 | GO:A0A078K0S5 | UniProt:A0A078K0S5 | InterPro:AMPK1_CBM |
| EnsemblPlants:CDY72539 | ProteinID:CDY72539 | ProteinID:CDY72539.1 | InterPro:DSP4 | InterPro:Dual-sp_phosphatase_cat-dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005982 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0007623 |
| GO:GO:0008138 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016311 | GO:GO:0016787 |
| GO:GO:0016791 | GO:GO:0019203 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00030437001 | InterPro:IPR000387 | InterPro:IPR013783 |
| InterPro:IPR029021 | InterPro:Ig-like_fold | InterPro:Ig_E-set | PFAM:PF00782 | PFAM:PF16561 | PFscan:PS50056 |
| PANTHER:PTHR10343 | PANTHER:PTHR10343:SF58 | InterPro:Prot-tyrosine_phosphatase-like | SUPFAM:SSF52799 | SUPFAM:SSF81296 | InterPro:TYR_PHOSPHATASE_dom |
| UniParc:UPI0004EDB9CE | SEG:seg | : | : | : | : |
Description
BnaAnng41430DBnaAnng41430D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K0S5]
Coordinates
chrLK051668:-:150..2071
Molecular Weight (calculated)
28304.9 Da
IEP (calculated)
7.019
GRAVY (calculated)
-0.382
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: LTNDTCRYFG VDIRSIQAYA KTFTDIEHIR CEIRDFDAFD LRMRLPAVLS TLYKAVKRNG GVTYVHCTAG MGRAPAVALT YMFWVQGYKL MEAHKILMSK
101: RTCFPKLDAI RNATIDILTG LKKKTVTLTL KDKGFSTVEI SGLDIGWGQR IPLTLDKGTG FWSLKRELPE GQFEYKYIID GEWTHNEQEP FTGPNKDGHT
201: NNYAKVVYDP TSVDGATRER LTREDPELLE DERLKLVQFL ETCSEAEV
101: RTCFPKLDAI RNATIDILTG LKKKTVTLTL KDKGFSTVEI SGLDIGWGQR IPLTLDKGTG FWSLKRELPE GQFEYKYIID GEWTHNEQEP FTGPNKDGHT
201: NNYAKVVYDP TSVDGATRER LTREDPELLE DERLKLVQFL ETCSEAEV
001: MNCLQNLPRC SVSPLLGFGC IQRDHSSSSS SLKMLISPPI KANDPKSRLV LHAVSESKSS SEMSGVAKDE EKSDEYSQDM TQAMGAVLTY RHELGMNYNF
101: IRPDLIVGSC LQTPEDVDKL RKIGVKTIFC LQQDPDLEYF GVDISSIQAY AKKYSDIQHI RCEIRDFDAF DLRMRLPAVV GTLYKAVKRN GGVTYVHCTA
201: GMGRAPAVAL TYMFWVQGYK LMEAHKLLMS KRSCFPKLDA IRNATIDILT GLKRKTVTLT LKDKGFSRVE ISGLDIGWGQ RIPLTLDKGT GFWILKRELP
301: EGQFEYKYII DGEWTHNEAE PFIGPNKDGH TNNYAKVVDD PTSVDGTTRE RLSSEDPELL EEERSKLIQF LETCSEAEV
101: IRPDLIVGSC LQTPEDVDKL RKIGVKTIFC LQQDPDLEYF GVDISSIQAY AKKYSDIQHI RCEIRDFDAF DLRMRLPAVV GTLYKAVKRN GGVTYVHCTA
201: GMGRAPAVAL TYMFWVQGYK LMEAHKLLMS KRSCFPKLDA IRNATIDILT GLKRKTVTLT LKDKGFSRVE ISGLDIGWGQ RIPLTLDKGT GFWILKRELP
301: EGQFEYKYII DGEWTHNEAE PFIGPNKDGH TNNYAKVVDD PTSVDGTTRE RLSSEDPELL EEERSKLIQF LETCSEAEV
Arabidopsis Description
DSP4SEX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.