Factsheet for Zm00001d027309_P007

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005108_P003
Zm00001d010811_P002
Zm00001d038745_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52180.1	Zm00001d005108_P003	AT3G29160.1	12148529
AT3G52180.1	Zm00001d010811_P002	AT3G29160.1	12148529
AT3G52180.1	Zm00001d038745_P002	AT3G29160.1	12148529

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40392	Sorghum	plastid	92.07	96.51
TraesCS4B01G360800.2	Wheat	plastid	79.28	84.01
TraesCS5A01G529100.1	Wheat	plastid	79.03	83.74
TraesCS4D01G353800.1	Wheat	plastid	79.03	83.74
HORVU4Hr1G086650.11	Barley	plastid	77.24	77.24
KRH34699	Soybean	nucleus	59.59	62.8
KRG92090	Soybean	plastid	59.08	62.26
CDY72539	Canola	cytosol	38.36	60.48
VIT_00s0250g00020.t01	Wine grape	mitochondrion	56.52	58.47
Solyc11g007830.1.1	Tomato	plastid	55.24	58.38
PGSC0003DMT400070294	Potato	plastid	53.96	57.03
CDX73654	Canola	mitochondrion, plastid	54.73	56.76
CDX78070	Canola	mitochondrion, plastid	54.73	56.76
Bra006908.1-P	Field mustard	plastid	50.9	56.37
Solyc03g111160.2.1	Tomato	mitochondrion, plastid	53.45	56.18
PGSC0003DMT400039423	Potato	mitochondrion, plastid	53.2	55.91
CDY23194	Canola	cytosol, plastid	53.45	55.44
GSMUA_Achr8P14150_001	Banana	cytosol, golgi, mitochondrion, plastid	59.08	55.4
AT3G52180.1	Thale cress	plastid	53.2	54.88
Bra033449.1-P	Field mustard	cytosol	52.43	37.14
Zm00001d044693_P001	Maize	plastid	24.04	33.57
Zm00001d032333_P004	Maize	plastid	21.23	13.93

Protein Annotations

EntrezGene:100216768	Gene3D:2.60.40.10	MapMan:3.2.3.2.1	Gene3D:3.90.190.10	UniProt:A0A1D6JKL8	InterPro:AMPK1_CBM
InterPro:DSP4	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005982	GO:GO:0005983
GO:GO:0006464	GO:GO:0006470	GO:GO:0007623	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016311
GO:GO:0016787	GO:GO:0016791	GO:GO:0019203	GO:GO:0019538	GO:GO:0030246	GO:GO:0030247
GO:GO:2001066	InterPro:IPR000387	InterPro:IPR013783	InterPro:IPR020422	InterPro:IPR029021	InterPro:Ig-like_fold
InterPro:Ig_E-set	ProteinID:ONL92727.1	ProteinID:ONL92728.1	PFAM:PF00782	PFAM:PF16561	PFscan:PS50056
PANTHER:PTHR10343	PANTHER:PTHR10343:SF58	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	SUPFAM:SSF81296
InterPro:TYR_PHOSPHATASE_DUAL_dom	InterPro:TYR_PHOSPHATASE_dom	UniParc:UPI000842840E	EnsemblPlantsGene:Zm00001d027309	EnsemblPlants:Zm00001d027309_P007	EnsemblPlants:Zm00001d027309_T007

Description

Phosphoglucan phosphatase DSP4 chloroplastic

Coordinates

chr1:-:2629290..2635834

Molecular Weight (calculated)

43943.6 Da

IEP (calculated)

5.910

GRAVY (calculated)

-0.299

Length

391 amino acids

Sequence
(BLAST)

001: MNCLQNLLKE PPIVGSRSMR RPSPLNLAMV RGGSRRSNTV KTLQAPGAST SGAESSAVEM GTEKSEVYST NMTQAMGAVW SINLSDMCFF SPHVIIALTY
101: RHELGMNYNF IRPDLIVGSC LQSPLDVDKL RKIGVKTVFC LQQDSDLEYF GVDIRAIQDY SLQFKDIVHC RAEIRDFDAF DLRLRLPAVV SKLHKLINCN
201: GGVTYIHCTA GLGRAPAVAL AYMFWILGYS LNEGHRLLQS KRACFPKLEA IKLATADILT GLSKNTITLK WEADGSSSVE ISGLDIGWGQ RIPLTYDEEK
301: GAWFLEKELP EGRYEYKYVV DGKWLCNEHE LITKPNADGH VNNYVQVSRD GTSDEEKELR ERLTGPDPDL TDQERLMIRE YLEQYADAAE R

Best Arabidopsis Sequence Match ( AT3G52180.1 )
(BLAST)

001: MNCLQNLPRC SVSPLLGFGC IQRDHSSSSS SLKMLISPPI KANDPKSRLV LHAVSESKSS SEMSGVAKDE EKSDEYSQDM TQAMGAVLTY RHELGMNYNF
101: IRPDLIVGSC LQTPEDVDKL RKIGVKTIFC LQQDPDLEYF GVDISSIQAY AKKYSDIQHI RCEIRDFDAF DLRMRLPAVV GTLYKAVKRN GGVTYVHCTA
201: GMGRAPAVAL TYMFWVQGYK LMEAHKLLMS KRSCFPKLDA IRNATIDILT GLKRKTVTLT LKDKGFSRVE ISGLDIGWGQ RIPLTLDKGT GFWILKRELP
301: EGQFEYKYII DGEWTHNEAE PFIGPNKDGH TNNYAKVVDD PTSVDGTTRE RLSSEDPELL EEERSKLIQF LETCSEAEV

Arabidopsis Description

DSP4SEX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.