Factsheet for HORVU1Hr1G093880.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G466300.1	Wheat	plastid	83.62	88.4
TraesCS1A01G431500.2	Wheat	plastid	82.51	88.12
TraesCS1D01G440600.1	Wheat	plastid	84.74	85.28
OQU80369	Sorghum	mitochondrion	72.18	82.85
Os08t0379300-01	Rice	plastid	73.77	78.25
Zm00001d032333_P004	Maize	plastid	71.86	75.84
GSMUA_Achr9P07030_001	Banana	plastid	59.14	68.51
VIT_14s0066g01200.t01	Wine grape	plastid	55.96	60.38
Solyc12g062260.1.1	Tomato	extracellular	17.17	57.14
PGSC0003DMT400077364	Potato	plastid	53.58	56.93
CDX91945	Canola	plastid	51.03	55.34
CDX74302	Canola	plastid	50.08	54.88
KRG94231	Soybean	plastid	51.19	54.67
KRH07193	Soybean	plastid	50.72	54.53
AT3G01510.1	Thale cress	plastid	50.4	53.64
Solyc12g062250.1.1	Tomato	plastid	47.54	52.18
HORVU5Hr1G046860.1	Barley	plastid	10.02	22.34
HORVU4Hr1G086650.11	Barley	plastid	13.35	21.48

Protein Annotations

MapMan:18.4.23.2.3	Gene3D:2.60.40.10	Gene3D:3.90.190.10	UniProt:A0A287GT56	InterPro:AMPK1_CBM	InterPro:Dual-sp_phosphatase_cat-dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0005983	GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009507	GO:GO:0009536	GO:GO:0009569	GO:GO:0009570
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0019203	GO:GO:0019538	GO:GO:0043036
EnsemblPlantsGene:HORVU1Hr1G093880	EnsemblPlants:HORVU1Hr1G093880.2	InterPro:IPR013783	InterPro:IPR020422	InterPro:IPR029021	InterPro:Ig-like_fold
InterPro:Ig_E-set	InterPro:LSF1	PFAM:PF00782	PFAM:PF16561	PFscan:PS50054	PANTHER:PTHR10343
PANTHER:PTHR10343:SF57	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00195	SUPFAM:SSF52799	SUPFAM:SSF81296	InterPro:TYR_PHOSPHATASE_DUAL_dom
UniParc:UPI000B4688A6	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:554264223..554272789

Molecular Weight (calculated)

70208.0 Da

IEP (calculated)

9.475

GRAVY (calculated)

-0.386

Length

629 amino acids

Sequence
(BLAST)

001: PSPHAPLIPR RSAPLRHSTP DHHRTAARSD PQIMALSLMP PLSIALPILT ARGRVRLGPP PAYRVRGAGA SSSRRRSGGR RRGLAVVAAT DGGEKEEDEE
101: GPAAAAGRMN LNEYMVAVDR PLGLRFALAV DGRVFVHSLK RGGNAEKSRI IMVGDTLKKA GTDHNEGLVS IKDLGDTEMV LKQESGPVNL VLERPFAPYP
201: IHQLHQNEDY HILFNRGRVP LPTWNSAMLA SKLNKSSPGN GKSGFAIFSP RLLSSQGWVL LSSEKDGLNR RSTNLANRIS EIVGFYSDED DMNAEWAHGS
301: FPLEEYIKAL DRAKGELYYN HSLGMQYSKI TEQIYVGSCI QTQKDVKMLS ETVGITAVLN FQSESERINW GINSEAINDS CRQNNILMIN YPIREVDSMD
401: LRKKLPFCVG LLLRLIRKNY RIYVTCTTGY DRSPACVIAY LHWVQDTPLH IAHKFITGLH SCRPDRAAIV WATWDLIALV ENGRHDGTPT HSVCFVWNSG
501: REGEDVELVG DFTSNWKDKL KCNHKGGSRY EADVRLRHGK YYYKFIVGGN WRHSTSLPSE TDEHGNVNNV IRVGDIARIR PAPSQLHIKD PSVVKVIERA
601: LTEDERFSLA FAARLMAFAI CPIRLSPKQ

Best Arabidopsis Sequence Match ( AT3G01510.1 )
(BLAST)

001: MAFLQQISGL GALERSCPSI MIGSSFRSGN GRVFDGRGIA YLGSREKFGF NRRRRVVLRV VAMSSSSTPF KMNLNEYMVT LEKPLGIRFA LSADGKIFVH
101: AIKKGSNAEK ARIIMVGDTL KKASDSSGGT LVEIKDFGDT KKMLVEKTGS FSLVLERPFS PFPIQYLLHL SDLDLLYNRG RVSFVTWNKN LLSSNLRASS
201: QGSGNSGYAA FSSKFFTPQG WKLLNRQSNS FQSGTKKNIL SPPISPLVSV FSEDVPGDGE WGYGNFPLEE YIKALDRSKG ELSYNHALGM RYSKITEQIY
301: VGSCIQTEED VENLSEAGIT AILNFQGGTE AQNWGIDSQS INDACQKSEV LMINYPIKDA DSFDLRKKLP LCVGLLLRLL KKNHRVFVTC TTGFDRSSAC
401: VIAYLHWMTD TSLHAAYSFV TGLHACKPDR PAIAWATWDL IAMVDDGKHD GTPTHSVTFV WNGHEGEEVL LVGDFTGNWK EPIKATHKGG PRFETEVRLT
501: QGKYYYKYII NGDWRHSATS PTERDDRGNT NNIIVVGDVA NVRPTIQQPR KDANIIKVIE RVLTESERFR LAKAARCIAF SVCPIRLCPK S

Arabidopsis Description

LSF1LSF1 [Source:UniProtKB/TrEMBL;Acc:A0A178V9M4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.