Factsheet for VIT_14s0108g01230.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0250g00020.t01
VIT_01s0011g03470.t01
VIT_05s0020g01570.t01
VIT_05s0020g01580.t01
VIT_05s0077g02310.t01
VIT_06s0004g02990.t01
VIT_06s0004g06150.t01
VIT_07s0129g01050.t01
VIT_09s0002g00720.t01
VIT_09s0054g00440.t01
VIT_14s0128g00890.t01
VIT_17s0000g01360.t01
VIT_17s0000g01460.t01
VIT_17s0000g02230.t01
VIT_18s0001g05020.t01
VIT_18s0001g09850.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G29160.1	VIT_06s0004g06150.t01	AT1G07310.1	21798944
AT3G29160.1	VIT_05s0020g01580.t01	AT1G09020.1	17028154
AT3G29160.1	VIT_14s0128g00890.t01	AT1G09020.1	17028154
AT3G29160.1	VIT_05s0020g01580.t01	AT1G09020.1	21558384
AT3G29160.1	VIT_14s0128g00890.t01	AT1G09020.1	21558384
AT3G29160.1	VIT_01s0011g03470.t01	AT1G25470.1	21798944
AT3G29160.1	VIT_09s0054g00440.t01	AT1G51600.1	21798944
AT3G29160.1	VIT_18s0001g05020.t01	AT1G78020.1	21798944
AT3G29160.1	VIT_07s0129g01050.t01	AT2G23290.1	21798944
AT3G29160.1	VIT_18s0001g09850.t01	AT2G23290.1	21798944
AT3G29160.1	VIT_09s0002g00720.t01	AT3G14180.1	21798944
AT3G29160.1	VIT_17s0000g02230.t01	AT3G17860.1	21798944
AT3G29160.1	VIT_06s0004g02990.t01	AT3G45240.1	19339507
AT3G29160.1	VIT_17s0000g01460.t01	AT3G48530.1	10417704
AT3G29160.1	VIT_17s0000g01360.t01	AT3G48550.1	21798944
AT3G29160.1	VIT_00s0250g00020.t01	AT3G52180.1	12148529
AT3G29160.1	VIT_05s0020g01570.t01	AT4G15730.1	21798944
AT3G29160.1	VIT_05s0077g02310.t01	AT4G15900.1	10220464
AT3G29160.1	VIT_06s0004g02990.t01	AT5G60550.1	19339507

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01228	Soybean	cytosol, nucleus	88.72	88.72
KRH44934	Soybean	cytosol, endoplasmic reticulum, nucleus	87.74	88.43
Solyc02g067030.2.1	Tomato	cytosol, nucleus	87.16	87.16
KRH18445	Soybean	cytosol, endoplasmic reticulum	86.19	86.02
CDY55800	Canola	cytosol	83.27	83.76
CDY34697	Canola	cytosol	83.27	83.76
CDY37545	Canola	cytosol	82.3	83.6
Bra039146.1-P	Field mustard	cytosol	82.1	83.4
CDY43267	Canola	cytosol	82.1	83.4
AT3G01090.2	Thale cress	cytosol	83.66	80.37
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane	71.6	80.35
AT3G29160.1	Thale cress	cytosol	79.57	79.88
CDY04058	Canola	cytosol	78.6	79.53
CDY44405	Canola	cytosol	79.18	79.34
EES01406	Sorghum	cytosol	76.85	79.16
TraesCS1D01G353300.1	Wheat	cytosol	76.85	79.0
TraesCS1B01G364800.1	Wheat	cytosol	76.85	79.0
Bra025379.1-P	Field mustard	cytosol	78.6	78.91
CDX86386	Canola	cytosol	78.6	78.75
CDX85250	Canola	cytosol	78.4	78.71
TraesCS1A01G350500.1	Wheat	cytosol	76.85	78.53
Bra033088.1-P	Field mustard	cytosol	74.71	78.21
Os05t0530500-02	Rice	cytosol, plasma membrane	76.65	78.02
CDX74283	Canola	cytosol	75.49	77.45
EES19859	Sorghum	cytosol	75.88	77.38
TraesCS3A01G282800.1	Wheat	cytosol	75.49	77.14
TraesCS3D01G282800.1	Wheat	cytosol	75.49	77.14
TraesCS3B01G316500.1	Wheat	cytosol	75.29	76.94
Zm00001d005108_P003	Maize	cytosol	74.9	76.54
HORVU1Hr1G081310.4	Barley	cytosol	76.85	75.96
PGSC0003DMT400063153	Potato	cytosol	68.09	69.44
HORVU3Hr1G069190.1	Barley	cytosol, plastid	75.29	67.78
GSMUA_Achr10P...	Banana	cytosol	80.54	66.77
Bra021482.1-P	Field mustard	cytosol	74.51	60.03
VIT_08s0040g00720.t01	Wine grape	cytosol	55.64	52.29
Zm00001d010811_P002	Maize	cytosol	67.32	46.69
Zm00001d038745_P002	Maize	cytosol	65.56	40.17
VIT_15s0048g02740.t01	Wine grape	cytosol	30.35	37.23
VIT_06s0009g01840.t01	Wine grape	cytosol	30.93	36.22
VIT_10s0003g04020.t01	Wine grape	cytosol	31.32	35.38
VIT_05s0020g00830.t01	Wine grape	cytosol	25.88	34.02
VIT_18s0001g07980.t01	Wine grape	cytosol	28.4	32.66
VIT_11s0016g05420.t01	Wine grape	cytosol	27.43	31.61
CDX91963	Canola	plasma membrane	76.26	31.61
VIT_11s0052g01700.t01	Wine grape	cytosol	27.82	30.62

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100254223	wikigene:100254223	MapMan:18.4.5.1.1	MapMan:27.3.1.1	EMBL:AM431938	ProteinID:CAN60476
ProteinID:CAN60476.1	ProteinID:CBI22259	ProteinID:CBI22259.3	UniProt:D7SXG2	EMBL:FN595239	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:IPR001772	InterPro:IPR015940	InterPro:KA1/Ssp2_C	InterPro:KA1_dom	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100254223	wikigene:LOC100254223	PFAM:PF00069	PFAM:PF00627	PFAM:PF02149	PIRSF:PIRSF000615
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50030	PFscan:PS50032	PANTHER:PTHR24343
PANTHER:PTHR24343:SF156	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00165	SMART:SM00220	SUPFAM:SSF103243
SUPFAM:SSF46934	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC61846	InterPro:UBA	InterPro:UBA-like_sf
UniParc:UPI0001BE2254	ArrayExpress:VIT_14s0108g01230	EnsemblPlantsGene:VIT_14s0108g01230	EnsemblPlants:VIT_14s0108g01230.t01	unigene:Vvi.3677	RefSeq:XP_002283999
RefSeq:XP_002283999.1	SEG:seg	:	:	:	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:D7SXG2]

Coordinates

chr14:-:29856681..29866389

Molecular Weight (calculated)

58705.6 Da

IEP (calculated)

8.444

GRAVY (calculated)

-0.243

Length

514 amino acids

Sequence
(BLAST)

001: MGCLGEMDGP TGRGGGGVDM FLSNYKLGKT LGIGSFGKVK IAEHALTGHK VAIKILNRRK IKNMEMEEKV RREIKILRLF MHPHIIRLYE VIETPSDIFV
101: VMEYVKSGEL FDYIVEKGRL QEEEARNFFQ QIISGVEYCH RNMVVHRDLK PENLLLDSKC NVKIADFGLS NIMRDGHFLK TSCGSPNYAA PEVISGRLYA
201: GPEVDVWSCG VILYALLCGT LPFDDENIPN LFKKIKGGIY TLPSHLSTGA RDLIPRMLIV DPMKRMTIPE IRQHPWFQAH LPRYLAVPPP DTIQQAKKID
301: EEILQEVVKM GFDRNLLVES LRNRVQNDAT VAYYLLLDNR FRVSSGYLGA EFQESLEYQF NRSEAGAVGQ RFPGYVDYQG MGLRTQFPAE RKWALGLQSR
401: AQPRQIMTEV LKALQELNVC WKKIGHYNMK CRWIPGIPGH HEGMVNNPVH SNHFFGDEPA IVENDGVSRN VVKFEVQLYK TREEKYLLDL QRVQGPQFLF
501: LDLCAAFLAQ LRVL

Best Arabidopsis Sequence Match ( AT3G01090.2 )
(BLAST)

001: MFKRVDEFNL VSSTIDHRIF KSRMDGSGTG SRSGVESILP NYKLGRTLGI GSFGRVKIAE HALTGHKVAI KILNRRKIKN MEMEEKVRRE IKILRLFMHP
101: HIIRLYEVIE TPTDIYLVME YVNSGELFDY IVEKGRLQED EARNFFQQII SGVEYCHRNM VVHRDLKPEN LLLDSKCNVK IADFGLSNIM RDGHFLKTSC
201: GSPNYAAPEV ISGKLYAGPE VDVWSCGVIL YALLCGTLPF DDENIPNLFK KIKGGIYTLP SHLSPGARDL IPRMLVVDPM KRVTIPEIRQ HPWFQAHLPR
301: YLAVPPPDTV QQAKKIDEEI LQEVINMGFD RNHLIESLRN RTQNDGTVTY YLILDNRFRA SSGYLGAEFQ ETMEGTPRMH PAESVASPVS HRLPGLMEYQ
401: GVGLRSQYPV ERKWALGLQS RAHPREIMTE VLKALQDLNV CWKKIGHYNM KCRWVPNSSA DGMLSNSMHD NNYFGDESSI IENEAAVKSP NVVKFEIQLY
501: KTRDDKYLLD LQRVQGPQFL FLDLCAAFLA QLRVL

Arabidopsis Description

KIN10SNF1-related protein kinase catalytic subunit alpha KIN10 [Source:UniProtKB/Swiss-Prot;Acc:Q38997]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.