Factsheet for VIT_10s0003g04020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00040.t01
VIT_02s0025g01630.t01
VIT_02s0025g01640.t01
VIT_02s0154g00260.t01
VIT_02s0236g00140.t01
VIT_02s0236g00150.t01
VIT_06s0004g05460.t01
VIT_11s0016g04750.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30270.1	VIT_06s0004g05460.t01	AT1G07430.1	17898163
AT1G30270.1	VIT_02s0154g00260.t01	AT1G12110.1	19766570
AT1G30270.1	VIT_02s0025g01640.t01	AT1G64480.1	16814720
AT1G30270.1	VIT_11s0016g04750.t01	AT2G26650.1	16814720
AT1G30270.1	VIT_11s0016g04750.t01	AT2G26650.1	17898163
AT1G30270.1	VIT_02s0025g01630.t01	AT4G01420.1	16814720
AT1G30270.1	VIT_02s0236g00140.t01	AT5G47100.1	14730064
AT1G30270.1	VIT_02s0236g00150.t01	AT5G47100.1	14730064
AT1G30270.1	VIT_02s0236g00140.t01	AT5G47100.1	16814720
AT1G30270.1	VIT_02s0236g00150.t01	AT5G47100.1	16814720
AT1G30270.1	VIT_02s0236g00140.t01	AT5G47100.1	17898163
AT1G30270.1	VIT_02s0236g00150.t01	AT5G47100.1	17898163
AT1G30270.1	VIT_02s0236g00140.t01	AT5G47100.1	21798944
AT1G30270.1	VIT_02s0236g00150.t01	AT5G47100.1	21798944
AT1G30270.1	VIT_00s0194g00040.t01	AT5G55990.1	16814720
AT1G30270.1	VIT_00s0194g00040.t01	AT5G55990.1	17898163

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g021440.2.1	Tomato	cytosol	87.25	86.87
PGSC0003DMT400080484	Potato	cytosol	86.81	86.81
KRH37794	Soybean	cytosol	85.27	83.98
Bra032374.1-P	Field mustard	plastid	83.96	81.8
CDY63182	Canola	mitochondrion	83.74	81.58
CDY26276	Canola	mitochondrion	82.86	81.43
GSMUA_Achr4P31540_001	Banana	cytosol	78.46	80.77
Os07t0150700-01	Rice	mitochondrion	79.78	80.67
OQU88438	Sorghum	cytosol, mitochondrion	76.26	80.51
AT1G30270.1	Thale cress	cytosol, plastid	85.05	80.29
Bra014875.1-P	Field mustard	plastid	84.4	80.17
TraesCS2D01G252600.1	Wheat	cytosol	79.56	79.91
CDX90240	Canola	plastid	83.74	79.87
CDX98191	Canola	plastid	84.62	79.71
CDX77603	Canola	plastid	84.4	79.67
GSMUA_Achr4P23000_001	Banana	cytosol	78.46	79.33
TraesCS2A01G251800.1	Wheat	cytosol	79.78	78.74
TraesCS2B01G271700.1	Wheat	cytosol	79.78	78.57
HORVU2Hr1G060350.5	Barley	cytosol	79.56	78.52
Bra010783.1-P	Field mustard	plastid	78.02	78.02
Zm00001d018799_P001	Maize	mitochondrion	80.0	75.99
VIT_15s0048g02740.t01	Wine grape	cytosol	69.01	74.94
VIT_06s0009g01840.t01	Wine grape	cytosol	70.77	73.35
KRH12829	Soybean	cytosol	38.46	64.1
VIT_18s0001g07980.t01	Wine grape	cytosol	55.82	56.82
VIT_11s0016g05420.t01	Wine grape	cytosol	55.6	56.73
CDY49976	Canola	cytosol	45.71	53.33
VIT_05s0020g00830.t01	Wine grape	cytosol	45.05	52.43
VIT_11s0052g01700.t01	Wine grape	cytosol	47.91	46.68
VIT_14s0108g01230.t01	Wine grape	cytosol	35.38	31.32
VIT_08s0040g00720.t01	Wine grape	cytosol	32.75	27.24

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100253180	wikigene:100253180	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	ProteinID:ACQ83520
ProteinID:ACQ83520.1	EMBL:AM467312	ProteinID:CAN72580	ProteinID:CAN72580.1	ProteinID:CBI30940	ProteinID:CBI30940.3
ProteinID:CBW30552	ProteinID:CBW30552.1	EntrezGene:CIPK04	wikigene:CIPK04	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	UniProt:D7TKB8
EMBL:FJ901232	EMBL:FN595992	EMBL:FR669159	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf
InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF11	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC62663	UniParc:UPI00019842D2
ArrayExpress:VIT_10s0003g04020	EnsemblPlantsGene:VIT_10s0003g04020	EnsemblPlants:VIT_10s0003g04020.t01	unigene:Vvi.9644	RefSeq:XP_010655433.1	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:D7TKB8]

Coordinates

chr10:+:6828348..6838085

Molecular Weight (calculated)

51190.8 Da

IEP (calculated)

9.277

GRAVY (calculated)

-0.371

Length

455 amino acids

Sequence
(BLAST)

001: MASRSSTGRT RVGKYELGRT LGEGTFAKVK FARNVETGEN VAIKILDKEK VLKHKMIGQI KREISTMKLI RHPNVIRMHE VMASKTKIYI VLEFVTGGEL
101: FDKIASKGRL KEDEARKYFQ QLINAVDYCH SRCVFHRDLK PENLLLDANG VLKVSDFGLS ALPQQVREDG LLHTTCGTPN YVAPEVINNK GYDGAKADLW
201: SCGVILFVLM AGYLPFEESN LMALYKKIFK ADFTFPPWLS SSAKKLIKRI LDPNPETRIT IAEVIENEWF KKGYKPPSFE QADVSLDDVD AIFDESGDSQ
301: NLVVERREER PTTPVTLNAF ELISTSQGLN LGTLFEKPMG LVKRETRFTS KRPANEIISK IEETAMPLGF DVKKNNFKMK LQGEKTGRKG HLSIATEIFE
401: VAPSLYMVEL RKSGGDTLEF HKFYKNLSTG LKDIVWKSGD ESKEEVNNGS GVAST

Best Arabidopsis Sequence Match ( AT1G30270.1 )
(BLAST)

001: MASRTTPSRS TPSRSTPSGS SSGGRTRVGK YELGRTLGEG TFAKVKFARN VENGDNVAIK VIDKEKVLKN KMIAQIKREI STMKLIKHPN VIRMFEVMAS
101: KTKIYFVLEF VTGGELFDKI SSNGRLKEDE ARKYFQQLIN AVDYCHSRGV YHRDLKPENL LLDANGALKV SDFGLSALPQ QVREDGLLHT TCGTPNYVAP
201: EVINNKGYDG AKADLWSCGV ILFVLMAGYL PFEDSNLTSL YKKIFKAEFT CPPWFSASAK KLIKRILDPN PATRITFAEV IENEWFKKGY KAPKFENADV
301: SLDDVDAIFD DSGESKNLVV ERREEGLKTP VTMNAFELIS TSQGLNLGSL FEKQMGLVKR KTRFTSKSSA NEIVTKIEAA AAPMGFDVKT NNYKMKLTGE
401: KSGRKGQLAV ATEVFQVAPS LYMVEMRKSG GDTLEFHKFY KNLTTGLKDI VWKTIDEEKE EGTDGGGTNG AMANRTIAKQ ST

Arabidopsis Description

CIPK23CBL-interacting serine/threonine-protein kinase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q93VD3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.