Factsheet for PGSC0003DMT400080484

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400002746
PGSC0003DMT400011576
PGSC0003DMT400012226
PGSC0003DMT400014960
PGSC0003DMT400014962
PGSC0003DMT400032493
PGSC0003DMT400035882
PGSC0003DMT400037245
PGSC0003DMT400046089
PGSC0003DMT400049695
PGSC0003DMT400052805
PGSC0003DMT400057342
PGSC0003DMT400068352
PGSC0003DMT400076653

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30270.1	PGSC0003DMT400049695	AT1G07430.1	17898163
AT1G30270.1	PGSC0003DMT400012226	AT1G12110.1	19766570
AT1G30270.1	PGSC0003DMT400032493	AT1G12110.1	19766570
AT1G30270.1	PGSC0003DMT400035882	AT1G12110.1	19766570
AT1G30270.1	PGSC0003DMT400046089	AT1G64480.1	16814720
AT1G30270.1	PGSC0003DMT400002746	AT2G26650.1	16814720
AT1G30270.1	PGSC0003DMT400002746	AT2G26650.1	17898163
AT1G30270.1	PGSC0003DMT400014960	AT4G01420.1	16814720
AT1G30270.1	PGSC0003DMT400014962	AT4G01420.1	16814720
AT1G30270.1	PGSC0003DMT400011576	AT5G47100.1	14730064
AT1G30270.1	PGSC0003DMT400052805	AT5G47100.1	14730064
AT1G30270.1	PGSC0003DMT400068352	AT5G47100.1	14730064
AT1G30270.1	PGSC0003DMT400011576	AT5G47100.1	16814720
AT1G30270.1	PGSC0003DMT400052805	AT5G47100.1	16814720
AT1G30270.1	PGSC0003DMT400068352	AT5G47100.1	16814720
AT1G30270.1	PGSC0003DMT400011576	AT5G47100.1	17898163
AT1G30270.1	PGSC0003DMT400052805	AT5G47100.1	17898163
AT1G30270.1	PGSC0003DMT400068352	AT5G47100.1	17898163
AT1G30270.1	PGSC0003DMT400011576	AT5G47100.1	21798944
AT1G30270.1	PGSC0003DMT400052805	AT5G47100.1	21798944
AT1G30270.1	PGSC0003DMT400068352	AT5G47100.1	21798944
AT1G30270.1	PGSC0003DMT400037245	AT5G55990.1	16814720
AT1G30270.1	PGSC0003DMT400057342	AT5G55990.1	16814720
AT1G30270.1	PGSC0003DMT400076653	AT5G55990.1	16814720
AT1G30270.1	PGSC0003DMT400037245	AT5G55990.1	17898163
AT1G30270.1	PGSC0003DMT400057342	AT5G55990.1	17898163
AT1G30270.1	PGSC0003DMT400076653	AT5G55990.1	17898163

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g021440.2.1	Tomato	cytosol	99.12	98.69
VIT_10s0003g04020.t01	Wine grape	cytosol	86.81	86.81
KRH37794	Soybean	cytosol	83.3	82.03
OQU88438	Sorghum	cytosol, mitochondrion	75.6	79.81
Os07t0150700-01	Rice	mitochondrion	78.24	79.11
TraesCS2D01G252600.1	Wheat	cytosol	78.68	79.03
Bra032374.1-P	Field mustard	plastid	81.1	79.02
CDY26276	Canola	mitochondrion	80.22	78.83
CDY63182	Canola	mitochondrion	80.88	78.8
TraesCS2A01G251800.1	Wheat	cytosol	78.9	77.87
GSMUA_Achr4P31540_001	Banana	cytosol	75.6	77.83
AT1G30270.1	Thale cress	cytosol, plastid	82.42	77.8
TraesCS2B01G271700.1	Wheat	cytosol	78.9	77.71
Bra014875.1-P	Field mustard	plastid	81.76	77.66
HORVU2Hr1G060350.5	Barley	cytosol	78.68	77.66
CDX90240	Canola	plastid	81.32	77.57
CDX98191	Canola	plastid	81.98	77.23
CDX77603	Canola	plastid	81.76	77.18
GSMUA_Achr4P23000_001	Banana	cytosol	76.04	76.89
Zm00001d018799_P001	Maize	mitochondrion	79.56	75.57
Bra010783.1-P	Field mustard	plastid	75.16	75.16
PGSC0003DMT400058480	Potato	cytosol	67.69	70.32
PGSC0003DMT400035574	Potato	cytosol, plastid	62.2	69.36
PGSC0003DMT400082382	Potato	cytosol	68.35	66.88
KRH12829	Soybean	cytosol	37.14	61.9
PGSC0003DMT400007475	Potato	cytosol	56.7	57.85
PGSC0003DMT400016336	Potato	cytosol	54.73	55.7
CDY49976	Canola	cytosol	45.27	52.82
PGSC0003DMT400069822	Potato	cytosol	47.91	47.81
PGSC0003DMT400011724	Potato	cytosol	49.23	42.18
PGSC0003DMT400063153	Potato	cytosol	34.73	31.35

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:102604911	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0007584	GO:GO:0008150	GO:GO:0008152	GO:GO:0009414	GO:GO:0009536
GO:GO:0009605	GO:GO:0009628	GO:GO:0009987	GO:GO:0009991	GO:GO:0010107	GO:GO:0010118
GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR018451	InterPro:Kinase-like_dom_sf	UniProt:M1D3K2	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069
PFAM:PF03822	EnsemblPlantsGene:PGSC0003DMG400031335	PGSC:PGSC0003DMG400031335	EnsemblPlants:PGSC0003DMT400080484	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF11	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294FB3D	RefSeq:XP_006361546.1

Description

CBL-interacting serine/threonine-protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400031335]

Coordinates

chr2:-:11576701..11584119

Molecular Weight (calculated)

51104.7 Da

IEP (calculated)

9.152

GRAVY (calculated)

-0.335

Length

455 amino acids

Sequence
(BLAST)

001: MGSRSNNGSG RTKVGRYELG RTLGEGTFAK VKFARNVETG DNVAIKILDK EKVMKHKMIG QIKREISTMK LIRHPNVIRM YEVMASKSKI YIVLEFVTGG
101: ELFDKIASKG RLKEDEARKY FQQLINAVDY CHSRGVFHRD LKPENLLLDA NGVLKVSDFG LSALPQQVRE DGLLHTTCGT PNYVAPEVIN NKGYDGAKAD
201: LWSCGVILFV LMAGYLPFEE SNLVALYKKI HKAEFTCPPW FSSNAKKLIK RILDPNPQTR ITITEVIENE WFKKGYCPPV FEQADVSLDD VNAIFDESAN
301: SSNLVVERRE VRPSAPLTMN AFELISTSQG LNLSSLFEKQ MGMVKRETRF TSRCPANEIV SKIEEAAVPL GFNVRKNNYK IKLQGEKSGR KGHLNVATEI
401: YEVAPSLYMV ELRKAGGDTL EFHKFYKNLS TGLKDIVWQL GDEAGEEVKD GIVST

Best Arabidopsis Sequence Match ( AT1G30270.1 )
(BLAST)

001: MASRTTPSRS TPSRSTPSGS SSGGRTRVGK YELGRTLGEG TFAKVKFARN VENGDNVAIK VIDKEKVLKN KMIAQIKREI STMKLIKHPN VIRMFEVMAS
101: KTKIYFVLEF VTGGELFDKI SSNGRLKEDE ARKYFQQLIN AVDYCHSRGV YHRDLKPENL LLDANGALKV SDFGLSALPQ QVREDGLLHT TCGTPNYVAP
201: EVINNKGYDG AKADLWSCGV ILFVLMAGYL PFEDSNLTSL YKKIFKAEFT CPPWFSASAK KLIKRILDPN PATRITFAEV IENEWFKKGY KAPKFENADV
301: SLDDVDAIFD DSGESKNLVV ERREEGLKTP VTMNAFELIS TSQGLNLGSL FEKQMGLVKR KTRFTSKSSA NEIVTKIEAA AAPMGFDVKT NNYKMKLTGE
401: KSGRKGQLAV ATEVFQVAPS LYMVEMRKSG GDTLEFHKFY KNLTTGLKDI VWKTIDEEKE EGTDGGGTNG AMANRTIAKQ ST

Arabidopsis Description

CIPK23CBL-interacting serine/threonine-protein kinase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q93VD3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.