Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014960 | Potato | cytosol | 80.61 | 66.39 |
| Bra002301.1-P | Field mustard | cytosol | 27.55 | 24.55 |
| KRH60052 | Soybean | cytosol | 53.06 | 22.61 |
| PGSC0003DMT400023568 | Potato | cytosol | 48.98 | 22.43 |
| CDX92464 | Canola | cytosol | 45.92 | 21.95 |
| VIT_02s0025g01630.t01 | Wine grape | cytosol | 58.16 | 21.67 |
| PGSC0003DMT400046089 | Potato | cytosol | 42.86 | 21.54 |
| CDY56859 | Canola | cytosol | 44.9 | 21.46 |
| PGSC0003DMT400068352 | Potato | cytosol | 45.92 | 20.93 |
| KRH41326 | Soybean | cytosol | 50.0 | 20.85 |
| AT4G01420.1 | Thale cress | cytosol | 42.86 | 20.69 |
| PGSC0003DMT400050430 | Potato | cytosol | 44.9 | 20.56 |
| PGSC0003DMT400057342 | Potato | cytosol, extracellular | 44.9 | 20.09 |
| PGSC0003DMT400011576 | Potato | cytosol | 42.86 | 19.72 |
| PGSC0003DMT400076653 | Potato | cytosol | 43.88 | 19.2 |
| PGSC0003DMT400037245 | Potato | cytosol | 42.86 | 18.92 |
| PGSC0003DMT400088667 | Potato | cytosol | 42.86 | 18.75 |
| PGSC0003DMT400076980 | Potato | mitochondrion | 47.96 | 16.21 |
| PGSC0003DMT400052805 | Potato | cytosol | 40.82 | 15.33 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400014962 | EnsemblPlantsGene:PGSC0003DMG400005841 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF85 |
| PFAM:PF00036 | PFscan:PS50222 | PGSC:PGSC0003DMG400005841 | PRINTS:PR00450 | ScanProsite:PS00018 | SUPFAM:SSF47473 |
| UniParc:UPI000294A7EC | UniProt:M1A568 | MapMan:35.1 | : | : | : |
Description
Calcineurin B [Source:PGSC_GENE;Acc:PGSC0003DMG400005841]
Coordinates
chr8:-:5201266..5202159
Molecular Weight (calculated)
11404.8 Da
IEP (calculated)
4.497
GRAVY (calculated)
0.138
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MFNLFDSNKD GLIDVEEFIR TLSIFHPDAS QAEKIAVAFK LYDIWQTGFI GHKEVKELIF GLLYESELIL TDDIVEVIID KVYMLRNSSL IYRNISRS
001: MMVLFISLML QEEFQLALFR NRNRRNLFAD RIFDVFDVKR NGVIEFGEFV RSLGVFHPSA PVHEKVKFAF KLYDLRQTGF IEREELKEMV VALLHESELV
101: LSEDMIEVMV DKAFVQADRK NDGKIDIDEW KDFVSLNPSL IKNMTLPYLK DINRTFPSFV SSCEEEEMEL QNVSS
101: LSEDMIEVMV DKAFVQADRK NDGKIDIDEW KDFVSLNPSL IKNMTLPYLK DINRTFPSFV SSCEEEEMEL QNVSS
Arabidopsis Description
CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.