Factsheet for Bra002301.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001665.1-P
Bra002301.1-P
Bra009293.1-P
Bra009294.1-P
Bra010783.1-P
Bra018319.1-P
Bra021628.1-P
Bra022219.1-P
Bra022794.1-P
Bra023777.1-P
Bra027311.1-P
Bra028709.1-P
Bra028912.1-P
Bra032374.1-P
Bra033893.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01420.1	Bra010783.1-P	AT1G30270.1	16814720
AT4G01420.1	Bra032374.1-P	AT1G30270.1	16814720
AT4G01420.1	Bra018319.1-P	AT2G30360.1	11230129
AT4G01420.1	Bra021628.1-P	AT2G30360.1	11230129
AT4G01420.1	Bra022794.1-P	AT2G30360.1	11230129
AT4G01420.1	Bra027311.1-P	AT2G30360.1	11230129
AT4G01420.1	Bra001665.1-P	AT3G17510.1	11230129
AT4G01420.1	Bra022219.1-P	AT3G17510.1	11230129
AT4G01420.1	Bra023777.1-P	AT3G23000.1	11230129
AT4G01420.1	Bra033893.1-P	AT3G23000.1	11230129
AT4G01420.1	Bra002301.1-P	AT4G01420.1	11402167
AT4G01420.1	Bra028912.1-P	AT5G01820.1	11230129
AT4G01420.1	Bra009293.1-P	AT5G07070.1	11230129
AT4G01420.1	Bra009294.1-P	AT5G07070.1	11230129
AT4G01420.1	Bra028709.1-P	AT5G07070.1	11230129

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92464	Canola	cytosol	100.0	53.66
AT4G01420.1	Thale cress	cytosol	86.36	46.8
PGSC0003DMT400014960	Potato	cytosol	49.09	45.38
Bra026462.1-P	Field mustard	cytosol	58.18	28.96
Bra009743.1-P	Field mustard	cytosol	57.27	28.51
PGSC0003DMT400014962	Potato	cytosol	24.55	27.55
KRH60052	Soybean	cytosol	56.36	26.96
Bra029396.1-P	Field mustard	cytosol	53.64	26.7
KRH41326	Soybean	cytosol	56.36	26.38
Bra012655.1-P	Field mustard	cytosol	50.0	25.82
Bra040169.1-P	Field mustard	cytosol	49.09	25.35
Bra022104.1-P	Field mustard	cytosol	48.18	24.88
Bra017504.1-P	Field mustard	cytosol	47.27	24.41
Bra028949.1-P	Field mustard	cytosol	48.18	24.09
Bra027703.1-P	Field mustard	mitochondrion	45.45	23.36
Bra035598.1-P	Field mustard	cytosol	47.27	23.01
Bra011404.1-P	Field mustard	cytosol, plastid	42.73	22.27
VIT_02s0025g01630.t01	Wine grape	cytosol	52.73	22.05
Bra026421.1-P	Field mustard	cytosol	43.64	22.02
Bra034543.1-P	Field mustard	cytosol	45.45	20.33
Bra037030.1-P	Field mustard	cytosol	47.27	20.16
Bra026422.1-P	Field mustard	cytosol, plastid	30.91	13.6

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EnsemblPlantsGene:Bra002301	EnsemblPlants:Bra002301.1	EnsemblPlants:Bra002301.1-P	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0006950	GO:GO:0006970
GO:GO:0008150	GO:GO:0009414	GO:GO:0009628	GO:GO:0009651	InterPro:IPR002048	UniProt:M4CDM0
PFAM:PF13499	PFscan:PS50222	PANTHER:PTHR23056	PANTHER:PTHR23056:SF85	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI0002544C1B	:	:	:	:	:

Description

AT4G01420 (E=5e-039) CBL5 | CBL5 (CALCINEURIN B-LIKE PROTEIN 5); calcium ion binding

Coordinates

chrA10:-:10414382..10416411

Molecular Weight (calculated)

12762.4 Da

IEP (calculated)

4.989

GRAVY (calculated)

-0.341

Length

110 amino acids

Sequence
(BLAST)

001: MGCVCSKHLG GKRTRHENIS LLTSQTIFAF RLYDTRQTGF IEPEEVKEMI IDVLEESELM LTESIIDSIV SKTFEEADRK KDGKIDLEEW ENFVARHPLT
101: LKNMTIPFLK

Best Arabidopsis Sequence Match ( AT4G01420.1 )
(BLAST)

001: MGCVCSKQLE GRRQEDISLL ASQTFFSEAE VEVLHGLFIK LTSCLSNDNL LTKEKFQFIL IKNTKKRSLS AERIFGLFDM RNDGAIDFGE FVHTLNIFHP
101: NSSPRDKAIF AFRLYDTRET GFIEPEEVKE MIIDVLEESE LMLSESIIDS IVSKTFEEAD WKKDGIIDLE EWENFVATYP LTLKNMTIPF LKDIPRIFPT
201: FLR

Arabidopsis Description

CBL5Calcineurin B-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q7FZF1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.