Factsheet for Bra011404.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007104.1-P
Bra013410.1-P
Bra014785.1-P
Bra025613.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	Bra007104.1-P	AT3G54840.1	17825054
AT4G33000.1	Bra014785.1-P	AT3G54840.1	17825054
AT4G33000.1	Bra013410.1-P	AT4G19640.1	17825054
AT4G33000.1	Bra025613.1-P	AT5G35410.1	17449811
AT4G33000.1	Bra025613.1-P	AT5G35410.1	17825054
AT4G33000.1	Bra025613.1-P	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75314	Canola	cytosol, endoplasmic reticulum	90.52	76.71
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	90.52	76.71
Bra037030.1-P	Field mustard	cytosol	87.68	71.71
Bra034543.1-P	Field mustard	cytosol	82.46	70.73
AT4G33000.1	Thale cress	golgi, plastid	83.89	69.14
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	75.36	61.87
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	74.41	60.85
VIT_04s0008g00960.t01	Wine grape	plastid	70.62	59.36
Os01t0711500-00	Rice	plastid	70.14	55.64
Bra026421.1-P	Field mustard	cytosol	57.35	55.5
KRH44162	Soybean	cytosol, extracellular	69.67	55.47
Bra035598.1-P	Field mustard	cytosol	58.77	54.87
KRH47134	Soybean	cytosol	68.25	54.75
Bra017504.1-P	Field mustard	cytosol	54.5	53.99
TraesCS3A01G053300.1	Wheat	golgi	74.41	53.77
Bra012655.1-P	Field mustard	cytosol	54.03	53.52
Bra022104.1-P	Field mustard	cytosol	54.03	53.52
Bra009743.1-P	Field mustard	cytosol	55.92	53.39
Bra040169.1-P	Field mustard	cytosol	53.55	53.05
TraesCS3D01G211300.1	Wheat	cytosol	72.04	52.78
Bra026462.1-P	Field mustard	cytosol	54.98	52.49
GSMUA_Achr3P32370_001	Banana	cytosol	65.4	52.27
TraesCS3B01G235500.1	Wheat	cytosol	71.09	52.08
TraesCS3B01G064500.2	Wheat	cytosol, golgi, mitochondrion	72.99	52.03
Bra028949.1-P	Field mustard	cytosol	54.03	51.82
PGSC0003DMT400076980	Potato	mitochondrion	71.09	51.72
KXG33232	Sorghum	endoplasmic reticulum	68.25	50.88
Bra027703.1-P	Field mustard	mitochondrion	51.18	50.47
KXG32770	Sorghum	cytosol, plastid	75.83	50.16
Bra029396.1-P	Field mustard	cytosol	52.13	49.77
KRH05482	Soybean	cytosol, plasma membrane, plastid	60.66	49.61
Zm00001d044285_P003	Maize	plastid	74.41	43.49
Bra002301.1-P	Field mustard	cytosol	22.27	42.73
TraesCS3A01G208300.2	Wheat	cytosol, mitochondrion	72.04	41.87
Bra026422.1-P	Field mustard	cytosol, plastid	45.97	38.8
Os01t0579600-01	Rice	cytosol	37.44	36.24

Protein Annotations

Gene3D:1.10.238.10	MapMan:26.6.1.1.3	EnsemblPlantsGene:Bra011404	EnsemblPlants:Bra011404.1	EnsemblPlants:Bra011404.1-P	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048
UniProt:M4D4K0	PFAM:PF00036	PFAM:PF13499	PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR23056	PANTHER:PTHR23056:SF26	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0002546069	SEG:seg

Description

AT4G33000 (E=1e-084) CBL10, ATCBL10 | CBL10 (CALCINEURIN B-LIKE 10); calcium ion binding

Coordinates

chrA01:-:2318789..2320114

Molecular Weight (calculated)

24337.3 Da

IEP (calculated)

4.403

GRAVY (calculated)

-0.075

Length

211 amino acids

Sequence
(BLAST)

001: MLRLPPPTIS SSMSPRGSGS SCTWISMFSV NEVEALYELF KKLSCSIIDD GLIHKEELRL ALFQAPYGEN LFLDRVFDLF DEKKNGVIEF EEFIHALSVF
101: HPYAPIEEKI DFAFRLYDLR QTGYIEREEV HQMVAAILME SEMILSDELL TMIIDKTFAD ADADKDGKIS KEEWKVYVLK HPTLLKNMTL PYLKDVTTAF
201: PSFIFNTEVE D

Best Arabidopsis Sequence Match ( AT4G33000.2 )
(BLAST)

001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED

Arabidopsis Description

CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.