CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 2
plasma membrane 2
extracellular 1
vacuole 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91957
KRG98019
KRH03685
KRH20053
KRH20252
KRH34819

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	KRG91957	AT3G54840.1	17825054
AT4G33000.1	KRH34819	AT3G54840.1	17825054
AT4G33000.1	KRG98019	AT4G19640.1	17825054
AT4G33000.1	KRH20053	AT4G19640.1	17825054
AT4G33000.1	KRH03685	AT5G35410.1	17449811
AT4G33000.1	KRH20252	AT5G35410.1	17449811
AT4G33000.1	KRH03685	AT5G35410.1	17825054
AT4G33000.1	KRH20252	AT5G35410.1	17825054
AT4G33000.1	KRH03685	AT5G35410.1	19448033
AT4G33000.1	KRH20252	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44162	Soybean	cytosol, extracellular	91.64	90.94
Bra011404.1-P	Field mustard	cytosol, plastid	54.75	68.25
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	62.74	66.27
CDX75314	Canola	cytosol, endoplasmic reticulum	62.74	66.27
CDY04300	Canola	cytosol	31.94	64.12
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	52.47	63.59
CDY45024	Canola	cytosol	59.32	63.41
Bra034543.1-P	Field mustard	cytosol	59.32	63.41
CDY28278	Canola	cytosol	58.56	62.6
Bra037030.1-P	Field mustard	cytosol	61.22	62.4
AT4G33000.1	Thale cress	golgi, plastid	58.94	60.55
CDX72384	Canola	cytosol	61.22	60.3
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	58.17	59.53
GSMUA_Achr3P32370_001	Banana	cytosol	58.56	58.33
Os01t0711500-00	Rice	plastid	58.17	57.52
KRH05482	Soybean	cytosol, plasma membrane, plastid	54.75	55.81
KRH46425	Soybean	endoplasmic reticulum	47.91	55.75
KRG98442	Soybean	cytosol	47.91	55.75
KRH01928	Soybean	cytosol	47.91	55.75
KRH51220	Soybean	endoplasmic reticulum	47.53	55.31
TraesCS3D01G211300.1	Wheat	cytosol	59.7	54.51
TraesCS3B01G235500.1	Wheat	cytosol	58.94	53.82
TraesCS3A01G053300.1	Wheat	golgi	59.32	53.42
KXG33232	Sorghum	endoplasmic reticulum	57.03	53.0
TraesCS3B01G064500.2	Wheat	cytosol, golgi, mitochondrion	59.32	52.7
KRH57533	Soybean	mitochondrion	42.21	52.11
KRH53498	Soybean	cytosol	43.73	51.57
KRH28207	Soybean	cytosol	41.44	51.42
KRH64445	Soybean	cytosol	43.35	51.12
KRH36643	Soybean	cytosol	43.35	50.44
PGSC0003DMT400076980	Potato	mitochondrion	55.13	50.0
KXG32770	Sorghum	cytosol, plastid	59.7	49.22
KRH04244	Soybean	cytosol	39.54	47.49
KRH41326	Soybean	cytosol	40.68	45.53
KRH60052	Soybean	cytosol	39.54	45.22
TraesCS3A01G208300.2	Wheat	cytosol, mitochondrion	60.08	43.53
Os01t0579600-01	Rice	cytosol	35.36	42.66
Zm00001d044285_P003	Maize	plastid	58.56	42.66

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100801943	MapMan:26.6.1.1.3	EMBL:ACUP02004137	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_07G010800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	UniProt:I1KGD3	InterPro:IPR002048	EnsemblPlants:KRH47134	ProteinID:KRH47134
ProteinID:KRH47134.1	PFAM:PF13499	PFAM:PF13833	PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR23056	PANTHER:PTHR23056:SF26	SMART:SM00054	SUPFAM:SSF47473	TMHMM:TMhelix	UniParc:UPI0002338806
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:825053..827729

Molecular Weight (calculated)

30443.2 Da

IEP (calculated)

4.756

GRAVY (calculated)

-0.186

Length

263 amino acids

Sequence
(BLAST)

001: MEFPDTRLSL RSSLTFGETL CSVFIPLIGI VEALVFTFAS CFDFQSPKKN KKHSSTFDDI LTLAEDSPFS VNEIEALHEL FKKLSSSIID DGLIHKEELA
101: LALLKTTTGE NLFLDRVFDV FDEKRNGIIE FEEFVHALSI FHPCTPLEKK IDFAFRLYDL RQTGYIEREE VRQMVVAILS EYGMDLDEEV LDTIIDKTFQ
201: DADTNKDDKI SKEEWKAFVI RHPTLLKHMT LPHLKDITTL FSSFIFNTEV DDSHWHFNGN HKH

Best Arabidopsis Sequence Match ( AT4G33000.2 )
(BLAST)

001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED

Arabidopsis Description

CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.