Factsheet for Bra034543.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 1
endoplasmic reticulum 2
plasma membrane 2
extracellular 1
vacuole 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007104.1-P
Bra013410.1-P
Bra014785.1-P
Bra025613.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	Bra007104.1-P	AT3G54840.1	17825054
AT4G33000.1	Bra014785.1-P	AT3G54840.1	17825054
AT4G33000.1	Bra013410.1-P	AT4G19640.1	17825054
AT4G33000.1	Bra025613.1-P	AT5G35410.1	17449811
AT4G33000.1	Bra025613.1-P	AT5G35410.1	17825054
AT4G33000.1	Bra025613.1-P	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45024	Canola	cytosol	99.19	99.19
Bra011404.1-P	Field mustard	cytosol, plastid	70.73	82.46
AT4G33000.1	Thale cress	golgi, plastid	85.77	82.42
Bra037030.1-P	Field mustard	cytosol	82.11	78.29
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	70.33	67.05
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	68.7	65.76
VIT_04s0008g00960.t01	Wine grape	plastid	64.63	63.35
GSMUA_Achr3P32370_001	Banana	cytosol	66.26	61.74
Os01t0711500-00	Rice	plastid	65.45	60.53
KRH44162	Soybean	cytosol, extracellular	64.63	60.0
KRH47134	Soybean	cytosol	63.41	59.32
TraesCS3D01G211300.1	Wheat	cytosol	67.89	57.99
TraesCS3A01G053300.1	Wheat	golgi	68.7	57.88
TraesCS3B01G235500.1	Wheat	cytosol	67.48	57.64
Bra026421.1-P	Field mustard	cytosol	50.41	56.88
KRH05482	Soybean	cytosol, plasma membrane, plastid	59.35	56.59
TraesCS3B01G064500.2	Wheat	cytosol, golgi, mitochondrion	67.89	56.42
Bra012655.1-P	Field mustard	cytosol	48.37	55.87
KXG33232	Sorghum	endoplasmic reticulum	64.23	55.83
Bra035598.1-P	Field mustard	cytosol	51.22	55.75
PGSC0003DMT400076980	Potato	mitochondrion	65.45	55.52
Bra022104.1-P	Field mustard	cytosol	47.56	54.93
Bra040169.1-P	Field mustard	cytosol	47.15	54.46
Bra017504.1-P	Field mustard	cytosol	47.15	54.46
Bra009743.1-P	Field mustard	cytosol	48.78	54.3
Bra026462.1-P	Field mustard	cytosol	48.37	53.85
Bra027703.1-P	Field mustard	mitochondrion	46.75	53.74
KXG32770	Sorghum	cytosol, plastid	68.7	52.98
Bra028949.1-P	Field mustard	cytosol	46.75	52.27
Bra029396.1-P	Field mustard	cytosol	45.94	51.13
Zm00001d044285_P003	Maize	plastid	67.89	46.26
TraesCS3A01G208300.2	Wheat	cytosol, mitochondrion	67.89	46.01
Bra002301.1-P	Field mustard	cytosol	20.33	45.45
Os01t0579600-01	Rice	cytosol	38.21	43.12
Bra026422.1-P	Field mustard	cytosol, plastid	36.59	36.0

Protein Annotations

Gene3D:1.10.238.10	MapMan:26.6.1.1.3	EnsemblPlantsGene:Bra034543	EnsemblPlants:Bra034543.1	EnsemblPlants:Bra034543.1-P	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR002048	UniProt:M4F0E9	PFAM:PF13202	PFAM:PF13499
PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23056	PANTHER:PTHR23056:SF26	SMART:SM00054
SUPFAM:SSF47473	TMHMM:TMhelix	UniParc:UPI000254694A	:	:	:

Description

AT4G33000 (E=2e-116) CBL10, SCABP8, ATCBL10 | CBL10 (CALCINEURIN B-LIKE 10); calcium ion binding

Coordinates

chrA08:-:12909584..12911073

Molecular Weight (calculated)

28464.1 Da

IEP (calculated)

4.576

GRAVY (calculated)

-0.079

Length

246 amino acids

Sequence
(BLAST)

001: MDWTNVSSRS SSLTIGEQLC AVFVPFLVII DVLFSTVGQC FDCRRRRSTQ TCQHPDLTRL AHESQFSVNE VEALHELFKK LSCSIIDDGL IHKEELRLAL
101: FQAPNLFLDR VFDLFDEKKN GVIEFEEFIH VLTVFHPSAP IQEKIDFAFR LYDLRQTGFI EREEVHQMVA AILKESDMML SDELLTMIID KTFADADSDK
201: DGKISKEEWR VYVLEHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED

Best Arabidopsis Sequence Match ( AT4G33000.2 )
(BLAST)

001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED

Arabidopsis Description

CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.