Factsheet for TraesCS3A01G208300.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G140700.1
TraesCS1B01G157100.1
TraesCS1D01G139500.1
TraesCS4A01G035800.1
TraesCS4A01G294600.1
TraesCS4B01G019100.2
TraesCS4B01G268600.1
TraesCS4D01G017300.1
TraesCS4D01G267900.1
TraesCS5B01G014400.1
TraesCS5D01G022200.2
TraesCS7A01G377600.1
TraesCS7B01G279300.1
TraesCS7D01G374400.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	TraesCS1A01G140700.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS1B01G157100.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS1D01G139500.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4A01G035800.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4B01G268600.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4D01G267900.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4A01G294600.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS4B01G019100.2	AT4G19640.1	17825054
AT4G33000.1	TraesCS4D01G017300.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS5B01G014400.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS5D01G022200.2	AT4G19640.1	17825054
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	17449811
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	17449811
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	17449811
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	17825054
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	17825054
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	17825054
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	19448033
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	19448033
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G211300.1	Wheat	cytosol	77.69	97.92
TraesCS3B01G235500.1	Wheat	cytosol	77.69	97.92
TraesCS3A01G053300.1	Wheat	golgi	68.04	84.59
KXG32770	Sorghum	cytosol, plastid	64.74	73.67
Bra011404.1-P	Field mustard	cytosol, plastid	41.87	72.04
CDY04300	Canola	cytosol	25.34	70.23
Os01t0579600-01	Rice	cytosol	42.15	70.18
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	49.59	69.77
CDX75314	Canola	cytosol, endoplasmic reticulum	46.83	68.27
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	46.83	68.27
CDY45024	Canola	cytosol	46.01	67.89
Bra034543.1-P	Field mustard	cytosol	46.01	67.89
CDY28278	Canola	cytosol	45.73	67.48
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	46.83	66.15
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	39.39	65.9
GSMUA_Achr3P32370_001	Banana	cytosol	47.66	65.53
VIT_04s0008g00960.t01	Wine grape	plastid	44.35	64.14
AT4G33000.1	Thale cress	golgi, plastid	45.18	64.06
Zm00001d044285_P003	Maize	plastid	63.64	63.99
Bra037030.1-P	Field mustard	cytosol	45.45	63.95
CDX72384	Canola	cytosol	46.01	62.55
TraesCS5A01G124700.1	Wheat	cytosol	38.57	61.95
KRH44162	Soybean	cytosol, extracellular	44.9	61.51
KRH47134	Soybean	cytosol	43.53	60.08
TraesCS5A01G060600.1	Wheat	cytosol	36.91	59.56
TraesCS1A01G215800.1	Wheat	cytosol	35.26	59.53
TraesCS5A01G545500.2	Wheat	cytosol	34.99	59.07
TraesCS4A01G245500.1	Wheat	cytosol	36.09	58.22
KRH05482	Soybean	cytosol, plasma membrane, plastid	41.05	57.75
TraesCS1A01G261200.1	Wheat	cytosol	34.99	56.7
TraesCS1A01G352200.1	Wheat	cytosol	34.44	56.31
PGSC0003DMT400076980	Potato	mitochondrion	43.8	54.83

Protein Annotations

EnsemblPlants:TraesCS3A01G208300.2	EnsemblPlantsGene:TraesCS3A01G208300	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF26
PFAM:PF13202	PFAM:PF13833	PFscan:PS50222	PRINTS:PR00450	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	TIGR:cd00051	MapMan:26.6.1.1.3	:	:

Description

No Description!

Coordinates

chr3A:+:368411113..368413759

Molecular Weight (calculated)

40947.7 Da

IEP (calculated)

5.321

GRAVY (calculated)

-0.176

Length

363 amino acids

Sequence
(BLAST)

001: MIITARKSQL KASRRHTATE LYLVLLQAQC PSPQNDTAGH AGEPLNEQGE GAVVGYAAMD SRFSSGSGDV RSGSSLTVGE RLCAAFLPFV AVAEAVFFVL
101: ADCLADICPS SSSSSRLRRE SSASSFLTAK KKSHHLFRRR VGPGCTSLDF RNLARLAEES RCFSVNEVEA LFELYKKISC SIIDDGLIHK EELQLALFKT
201: PSGQNLFIDR VFDLFDEKKN GVIEFDEFIH ALSVFHPCSP VEDKINFAFK LYDLRQTGFI EREEVMQMVI AILNESDMKL SDELLEAIID KFQFQKNFSR
301: CKCYLTFQTF EDADTDRDGK ISQEEWKEFV LRHPNLLKNM TLPYLRDITT SFPSFVFNTA VED

Best Arabidopsis Sequence Match ( AT4G26570.1 )
(BLAST)

001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT

Arabidopsis Description

ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.