Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G178500.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS1B01G229300.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU1Hr1G055300.1 | Barley | cytosol | 99.07 | 99.07 |
| EER94470 | Sorghum | cytosol | 92.56 | 93.43 |
| Zm00001d029976_P004 | Maize | cytosol, mitochondrion | 92.09 | 92.96 |
| Os10t0564800-01 | Rice | plasma membrane | 92.09 | 92.96 |
| VIT_02s0236g00140.t01 | Wine grape | cytosol | 82.33 | 83.1 |
| TraesCS5A01G545500.2 | Wheat | cytosol | 82.79 | 82.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 81.86 | 82.63 |
| GSMUA_Achr4P30070_001 | Banana | cytosol | 80.0 | 80.75 |
| PGSC0003DMT400068352 | Potato | cytosol | 80.0 | 80.0 |
| Solyc08g077770.2.1 | Tomato | cytosol | 78.14 | 78.87 |
| CDX90465 | Canola | cytosol | 78.14 | 78.87 |
| Bra012655.1-P | Field mustard | cytosol | 78.14 | 78.87 |
| GSMUA_Achr4P26350_001 | Banana | cytosol | 78.14 | 78.87 |
| PGSC0003DMT400011576 | Potato | cytosol | 77.67 | 78.4 |
| VIT_02s0236g00150.t01 | Wine grape | cytosol | 80.47 | 77.58 |
| AT5G47100.1 | Thale cress | cytosol | 76.74 | 77.46 |
| Bra022104.1-P | Field mustard | cytosol | 76.28 | 77.0 |
| CDY28977 | Canola | cytosol | 76.28 | 77.0 |
| CDY09616 | Canola | cytosol | 76.28 | 77.0 |
| Bra040169.1-P | Field mustard | cytosol | 75.81 | 76.53 |
| CDY38412 | Canola | cytosol | 75.81 | 76.53 |
| CDY69850 | Canola | cytosol | 75.81 | 76.53 |
| CDY25987 | Canola | cytosol | 75.81 | 76.53 |
| Bra017504.1-P | Field mustard | cytosol | 75.81 | 76.53 |
| CDX78784 | Canola | cytosol | 75.35 | 76.06 |
| CDY40580 | Canola | cytosol | 75.35 | 76.06 |
| Solyc06g060980.1.1 | Tomato | cytosol, mitochondrion | 75.35 | 75.35 |
| Zm00001d000046_P001 | Maize | cytosol | 60.0 | 73.3 |
| Solyc08g007160.2.1 | Tomato | cytosol | 72.56 | 72.56 |
| KRH57533 | Soybean | mitochondrion | 71.63 | 72.3 |
| KRH28207 | Soybean | cytosol | 70.7 | 71.7 |
| KRH04244 | Soybean | cytosol | 66.05 | 64.84 |
| TraesCS5A01G060600.1 | Wheat | cytosol | 66.98 | 64.0 |
| TraesCS4A01G245500.1 | Wheat | cytosol | 65.12 | 62.22 |
| AT4G17615.3 | Thale cress | cytosol | 69.77 | 59.52 |
| TraesCS5A01G124700.1 | Wheat | cytosol | 61.86 | 58.85 |
| TraesCS1A01G261200.1 | Wheat | cytosol | 57.67 | 55.36 |
| PGSC0003DMT400052805 | Potato | cytosol | 66.98 | 55.17 |
| TraesCS1A01G352200.1 | Wheat | cytosol | 56.74 | 54.95 |
| TraesCS3A01G053300.1 | Wheat | golgi | 58.6 | 43.15 |
| TraesCS3A01G208300.2 | Wheat | cytosol, mitochondrion | 59.53 | 35.26 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G215800.1 | EnsemblPlantsGene:TraesCS1A01G215800 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF41 |
| PFAM:PF13499 | PFscan:PS50222 | PRINTS:PR00450 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| TIGR:cd00051 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:381314624..381318682
Molecular Weight (calculated)
24669.3 Da
IEP (calculated)
4.567
GRAVY (calculated)
-0.248
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCIQSTPKR RQHPAGYEDP VHLASQTAFS VSEVEALFEL FKSISGSVID DGLINKEEFQ LALFKNTRKE NLFANRIFDL FDVKKRGVID FGDFVRALNV
101: FHPNFPVEEK IDFSFKLYDM DGTGFIERKE VKQMLIALLG ESEMRLSDEI VETILDKTFS DADTNQDGKI DRTEWENFVS RNPSLLKIMT LSYLKDITTT
201: FPSFVFHSEV DDIVT
101: FHPNFPVEEK IDFSFKLYDM DGTGFIERKE VKQMLIALLG ESEMRLSDEI VETILDKTFS DADTNQDGKI DRTEWENFVS RNPSLLKIMT LSYLKDITTT
201: FPSFVFHSEV DDIVT
001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
Arabidopsis Description
CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.