Factsheet for VIT_02s0236g00150.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_04s0008g05770.t01
VIT_05s0020g00830.t01
VIT_06s0004g07830.t01
VIT_06s0004g07870.t01
VIT_10s0003g01420.t01
VIT_10s0003g04020.t01
VIT_11s0016g00200.t01
VIT_11s0016g05420.t01
VIT_11s0052g01700.t01
VIT_18s0001g07980.t01
VIT_19s0014g01890.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47100.1	VIT_10s0003g04020.t01	AT1G30270.1	14730064
AT5G47100.1	VIT_10s0003g04020.t01	AT1G30270.1	16814720
AT5G47100.1	VIT_10s0003g04020.t01	AT1G30270.1	17898163
AT5G47100.1	VIT_05s0020g00830.t01	AT1G48260.1	14730064
AT5G47100.1	VIT_04s0008g05770.t01	AT2G25090.1	14730064
AT5G47100.1	VIT_04s0008g05770.t01	AT2G25090.1	17898163
AT5G47100.1	VIT_06s0004g07870.t01	AT2G30360.1	14730064
AT5G47100.1	VIT_06s0004g07870.t01	AT2G30360.1	21798944
AT5G47100.1	VIT_19s0014g01890.t01	AT3G15090.1	21798944
AT5G47100.1	VIT_05s0020g00830.t01	AT3G17510.1	14730064
AT5G47100.1	VIT_05s0020g00830.t01	AT3G17510.1	17092313
AT5G47100.1	VIT_10s0003g01420.t01	AT4G18700.1	14730064
AT5G47100.1	VIT_18s0001g07980.t01	AT4G24400.1	14730064
AT5G47100.1	VIT_11s0016g00200.t01	AT4G30960.1	17898163
AT5G47100.1	VIT_04s0008g05770.t01	AT5G10930.1	14730064
AT5G47100.1	VIT_11s0016g05420.t01	AT5G35410.1	14730064
AT5G47100.1	VIT_11s0052g01700.t01	AT5G57630.1	14730064
AT5G47100.1	VIT_06s0004g07830.t01	AT5G58380.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0236g00140.t01	Wine grape	cytosol	93.27	97.65
Solyc08g077770.2.1	Tomato	cytosol	83.41	87.32
PGSC0003DMT400011576	Potato	cytosol	82.96	86.85
Bra012655.1-P	Field mustard	cytosol	82.06	85.92
CDX90465	Canola	cytosol	82.06	85.92
GSMUA_AchrUn_...	Banana	cytosol	81.61	85.45
Bra040169.1-P	Field mustard	cytosol	81.17	84.98
CDX78784	Canola	cytosol	81.17	84.98
CDY38412	Canola	cytosol	81.17	84.98
CDY09616	Canola	cytosol	80.72	84.51
AT5G47100.1	Thale cress	cytosol	80.27	84.04
CDY28977	Canola	cytosol	79.82	83.57
GSMUA_Achr4P30070_001	Banana	cytosol	79.82	83.57
Bra022104.1-P	Field mustard	cytosol	79.82	83.57
CDY40580	Canola	cytosol	78.92	82.63
CDY69850	Canola	cytosol	78.92	82.63
CDY25987	Canola	cytosol	78.92	82.63
Bra017504.1-P	Field mustard	cytosol	78.92	82.63
GSMUA_Achr4P26350_001	Banana	cytosol	78.48	82.16
Os10t0564800-01	Rice	plasma membrane	78.48	82.16
EER94470	Sorghum	cytosol	77.58	81.22
Zm00001d029976_P004	Maize	cytosol, mitochondrion	77.13	80.75
TraesCS1A01G215800.1	Wheat	cytosol	77.58	80.47
TraesCS1B01G229300.1	Wheat	cytosol	77.58	80.47
TraesCSU01G178500.1	Wheat	cytosol	77.58	80.47
HORVU1Hr1G055300.1	Barley	cytosol	77.58	80.47
KRH57533	Soybean	mitochondrion	73.09	76.53
TraesCS4B01G379200.1	Wheat	cytosol	69.06	75.86
TraesCSU01G129500.1	Wheat	cytosol, mitochondrion	73.09	75.46
TraesCS5A01G545500.2	Wheat	cytosol	72.65	75.35
HORVU4Hr1G090270.10	Barley	cytosol	73.09	75.12
KRH28207	Soybean	cytosol	70.4	74.06
VIT_00s1569g00020.t01	Wine grape	cytosol	58.74	71.2
KRH04244	Soybean	cytosol	66.82	68.04
AT4G17615.3	Thale cress	cytosol	75.78	67.06
VIT_16s0098g01870.t01	Wine grape	cytosol	62.33	65.26
Zm00001d000046_P001	Maize	cytosol	50.67	64.2
VIT_19s0015g01070.t01	Wine grape	extracellular	61.88	61.06
VIT_02s0025g01640.t01	Wine grape	cytosol	57.4	58.45
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	57.85	50.0
VIT_04s0008g00960.t01	Wine grape	plastid	53.36	47.41
VIT_02s0025g01630.t01	Wine grape	cytosol	51.57	43.73
VIT_00s0194g00040.t01	Wine grape	cytosol	14.35	7.9

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	ProteinID:CCB48328	ProteinID:CCB48328.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	UniProt:F6H7Y6	EMBL:FN595257	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:IPR002048	PFAM:PF13499	PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23056
PANTHER:PTHR23056:SF41	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0002109ACC	ArrayExpress:VIT_02s0236g00150	EnsemblPlantsGene:VIT_02s0236g00150
EnsemblPlants:VIT_02s0236g00150.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr2:+:5580916..5598295

Molecular Weight (calculated)

25705.5 Da

IEP (calculated)

4.351

GRAVY (calculated)

-0.240

Length

223 amino acids

Sequence
(BLAST)

001: MESELKEWEG CGDHIIQARK QFPGHEDPVI LASQTAFSVS EVEALFELFK SISSSVIDDG LINKEEFQLA LFKNRKKENL FANRIFDLFD VKRKGVIDFG
101: DFVRSLNVFH PNAPQEDKID FSFKLYDLDS TGFIERQEVK QMLIALLCES EMKLADETIE IILDKTFLEA DVNQDGRIDK SEWQNFVSRN PSLLKIMTLP
201: YLRDITTTFP SFVFNSEVDE IAT

Best Arabidopsis Sequence Match ( AT4G17615.4 )
(BLAST)

001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT

Arabidopsis Description

CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.