Factsheet for VIT_05s0020g00830.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00040.t01
VIT_02s0025g01630.t01
VIT_02s0236g00140.t01
VIT_02s0236g00150.t01
VIT_05s0020g00830.t01
VIT_06s0004g00200.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48260.1	VIT_02s0236g00140.t01	AT5G47100.1	14730064
AT1G48260.1	VIT_02s0236g00150.t01	AT5G47100.1	14730064
AT1G48260.1	VIT_00s0194g00040.t01	AT5G55990.1	21798944
AT3G17510.1	VIT_06s0004g00200.t01	AT3G13460.1	16113215
AT3G17510.1	VIT_05s0020g00830.t01	AT3G17510.1	10590166
AT3G17510.1	VIT_02s0025g01630.t01	AT4G01420.1	11230129
AT3G17510.1	VIT_02s0236g00140.t01	AT5G47100.1	14730064
AT3G17510.1	VIT_02s0236g00150.t01	AT5G47100.1	14730064
AT3G17510.1	VIT_02s0236g00140.t01	AT5G47100.1	17092313
AT3G17510.1	VIT_02s0236g00150.t01	AT5G47100.1	17092313
AT3G17510.1	VIT_00s0194g00040.t01	AT5G55990.1	10590166
AT3G17510.1	VIT_00s0194g00040.t01	AT5G55990.1	11230129

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12685	Soybean	cytosol	76.98	68.88
KRH19498	Soybean	cytosol	78.26	68.61
KRH37641	Soybean	cytosol	78.52	68.53
KRH02470	Soybean	cytosol	76.47	66.74
PGSC0003DMT400069822	Potato	cytosol	75.7	64.91
GSMUA_Achr3P13480_001	Banana	cytosol	68.54	64.42
GSMUA_Achr8P10920_001	Banana	cytosol	70.33	63.51
Solyc05g053210.2.1	Tomato	cytosol	74.17	63.04
CDX82366	Canola	cytosol	71.1	62.75
Solyc12g098910.1.1	Tomato	cytosol	74.94	62.74
AT3G17510.1	Thale cress	cytosol	71.1	62.61
Bra001665.1-P	Field mustard	cytosol	70.84	62.53
CDX75921	Canola	cytosol	70.59	62.16
GSMUA_Achr1P25010_001	Banana	cytosol	72.38	62.06
CDX92136	Canola	cytosol	70.59	61.88
AT1G48260.1	Thale cress	cytosol	68.29	61.81
Bra022219.1-P	Field mustard	cytosol	70.33	61.66
Os07t0637000-01	Rice	cytosol	69.31	61.04
CDX93655	Canola	cytosol	66.24	60.94
GSMUA_Achr11P...	Banana	cytosol	66.5	60.61
CDY43284	Canola	cytosol	65.98	60.56
CDY43285	Canola	cytosol	65.73	60.47
GSMUA_Achr11P...	Banana	cytosol	69.57	60.31
CDX93653	Canola	cytosol	65.47	60.24
CDX95849	Canola	plasma membrane	70.59	59.1
Bra014124.1-P	Field mustard	cytosol	62.92	58.85
CDY41846	Canola	cytosol	62.92	58.85
EER97615	Sorghum	cytosol	66.75	58.78
CDY23677	Canola	cytosol	59.34	58.15
HORVU2Hr1G027080.5	Barley	cytosol	67.01	58.09
TraesCS2D01G155700.1	Wheat	cytosol	67.01	58.09
TraesCS2B01G175800.2	Wheat	cytosol	66.5	57.65
TraesCS2A01G150600.2	Wheat	cytosol	66.5	57.65
GSMUA_AchrUn_...	Banana	cytosol	69.31	56.93
Os01t0292200-01	Rice	cytosol	65.98	55.97
Zm00001d040567_P001	Maize	cytosol	65.73	55.87
Zm00001d006944_P001	Maize	cytosol	68.03	55.65
PGSC0003DMT400011724	Potato	cytosol	75.45	55.56
Os05t0136200-01	Rice	cytosol	64.45	55.51
EES00612	Sorghum	cytosol	65.47	55.29
Zm00001d022272_P002	Maize	cytosol	67.26	55.14
OQU77359	Sorghum	cytosol, mitochondrion	64.19	54.45
Zm00001d024762_P001	Maize	cytosol	62.92	53.13
TraesCS1D01G082600.1	Wheat	cytosol	62.92	52.79
TraesCS1B01G098700.2	Wheat	cytosol	62.4	52.36
Bra032246.1-P	Field mustard	cytosol	59.59	52.24
TraesCS1B01G098600.1	Wheat	cytosol	62.15	52.15
TraesCS1A01G080500.2	Wheat	cytosol	62.15	52.03
TraesCS1A01G080600.1	Wheat	cytosol	61.64	51.72
TraesCS1D01G082200.1	Wheat	cytosol	61.13	51.4
TraesCS1A01G080700.1	Wheat	cytosol	61.89	51.38
TraesCS1D01G082500.1	Wheat	cytosol	62.4	50.83
HORVU1Hr1G017380.4	Barley	cytosol	62.4	49.29
HORVU1Hr1G017240.4	Barley	cytosol	61.64	48.98
VIT_15s0048g02740.t01	Wine grape	cytosol	50.13	46.78
VIT_06s0009g01840.t01	Wine grape	cytosol	51.15	45.56
VIT_10s0003g04020.t01	Wine grape	cytosol	52.43	45.05
VIT_18s0001g07980.t01	Wine grape	cytosol	47.31	41.39
VIT_11s0016g05420.t01	Wine grape	cytosol	46.8	41.03
VIT_11s0052g01700.t01	Wine grape	cytosol	47.57	39.83
VIT_14s0108g01230.t01	Wine grape	cytosol	34.02	25.88
VIT_08s0040g00720.t01	Wine grape	cytosol	31.2	22.3

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100259621	wikigene:100259621	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	ProteinID:ACQ83535
ProteinID:ACQ83535.1	ProteinID:CBI26015	ProteinID:CBI26015.3	EntrezGene:CIPK19	wikigene:CIPK19	UniProt:D7T694
EMBL:FJ901247	EMBL:FN595749	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain
InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50816	PANTHER:PTHR24343	PANTHER:PTHR24343:SF143	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGR:TC61011	UniParc:UPI0001BE2A61	ArrayExpress:VIT_05s0020g00830	EnsemblPlantsGene:VIT_05s0020g00830	EnsemblPlants:VIT_05s0020g00830.t01
unigene:Vvi.8630	SEG:seg	:	:	:	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:D7T694]

Coordinates

chr5:-:2672344..2676586

Molecular Weight (calculated)

44049.9 Da

IEP (calculated)

6.432

GRAVY (calculated)

-0.343

Length

391 amino acids

Sequence
(BLAST)

001: MERLYNEGGE GGGIKREIAT LKLLKHPNVV RLHEVLASKT KIYMVLEYVT GGELFDRIAS NGKLSEAEGR KLFQQLIDAV SYCHNKGVFH RDLKLENVLV
101: DSKGNIKISD FGLSALPQHF RDDGLLHTTC GSPNYVAPEI LANRGYDGST SDIWSCGVIL YVILTGYLPF DDRNLAVLYQ KIFKGDAQMP KWLSSGAKNI
201: IKRILDPKPE TRITMAGIKA DEWFKQQYTP AYPEEEEEDI HVDDEAFSIY EPMEAKKSPG SPNLINAFQL IGMSSCLDLS GFFEKEDVSE RKIRFTSNHC
301: PKDLLEKIED IVTEMGFRVE KKNGRLKVMQ EHKCQKSFGS LSVAAEVFEI SPSLYVVELR KSYGDSSVYR QLCKKLSSDL GVPTSQELLK V

Best Arabidopsis Sequence Match ( AT3G17510.1 )
(BLAST)

001: MVRRQEEEKK AEKGMRLGKY ELGRTLGEGN FGKVKFAKDT VSGHSFAVKI IDKSRIADLN FSLQIKREIR TLKMLKHPHI VRLHEVLASK TKINMVMELV
101: TGGELFDRIV SNGKLTETDG RKMFQQLIDG ISYCHSKGVF HRDLKLENVL LDAKGHIKIT DFGLSALPQH FRDDGLLHTT CGSPNYVAPE VLANRGYDGA
201: ASDIWSCGVI LYVILTGCLP FDDRNLAVLY QKICKGDPPI PRWLSPGART MIKRMLDPNP VTRITVVGIK ASEWFKLEYI PSIPDDDDEE EVDTDDDAFS
301: IQELGSEEGK GSDSPTIINA FQLIGMSSFL DLSGFFEQEN VSERRIRFTS NSSAKDLLEK IETAVTEMGF SVQKKHAKLR VKQEERNQKG QVGLSVTAEV
401: FEIKPSLNVV ELRKSYGDSC LYRQLYERLL KDVGTSSPEQ EIVT

Arabidopsis Description

CIPK1CBL-interacting serine/threonine-protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWC9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.