CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY11963
CDY25987
CDY28977
CDY36774
CDY40580
CDY69850

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48260.1	CDY25987	AT5G47100.1	14730064
AT1G48260.1	CDY28977	AT5G47100.1	14730064
AT1G48260.1	CDY40580	AT5G47100.1	14730064
AT1G48260.1	CDY69850	AT5G47100.1	14730064
AT1G48260.1	CDY11963	AT5G55990.1	21798944
AT1G48260.1	CDY36774	AT5G55990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43285	Canola	cytosol	96.47	96.47
CDX93653	Canola	cytosol	96.47	96.47
CDY43284	Canola	cytosol	94.12	93.9
CDY41846	Canola	cytosol	83.76	85.17
CDY23677	Canola	cytosol	78.35	83.46
AT1G48260.1	Thale cress	cytosol	82.82	81.48
CDX82366	Canola	cytosol	77.41	74.27
CDX75921	Canola	cytosol	76.94	73.65
CDX92136	Canola	cytosol	76.71	73.09
CDX95849	Canola	plasma membrane	76.71	69.81
VIT_05s0020g00830.t01	Wine grape	cytosol	60.94	66.24
GSMUA_Achr3P13480_001	Banana	cytosol	63.06	64.42
KRH12685	Soybean	cytosol	65.65	63.84
KRH37641	Soybean	cytosol	67.29	63.84
KRH19498	Soybean	cytosol	65.41	62.33
KRH02470	Soybean	cytosol	65.18	61.83
PGSC0003DMT400069822	Potato	cytosol	64.94	60.53
GSMUA_Achr8P10920_001	Banana	cytosol	61.18	60.05
Solyc05g053210.2.1	Tomato	cytosol	64.94	60.0
Solyc12g098910.1.1	Tomato	cytosol	65.88	59.96
GSMUA_Achr11P...	Banana	cytosol	60.0	59.44
GSMUA_Achr11P...	Banana	cytosol	62.59	58.98
GSMUA_Achr1P25010_001	Banana	cytosol	62.12	57.89
Os07t0637000-01	Rice	cytosol	59.53	56.98
GSMUA_AchrUn_...	Banana	cytosol	63.06	56.3
EES00612	Sorghum	cytosol	59.29	54.43
Zm00001d040567_P001	Maize	cytosol	58.82	54.35
EER97615	Sorghum	cytosol	56.24	53.83
TraesCS2D01G155700.1	Wheat	cytosol	56.94	53.66
HORVU2Hr1G027080.5	Barley	cytosol	56.94	53.66
Os01t0292200-01	Rice	cytosol	58.12	53.58
TraesCS2A01G150600.2	Wheat	cytosol	56.47	53.22
TraesCS2B01G175800.2	Wheat	cytosol	56.47	53.22
PGSC0003DMT400011724	Potato	cytosol	66.35	53.11
Os05t0136200-01	Rice	cytosol	56.71	53.08
OQU77359	Sorghum	cytosol, mitochondrion	57.18	52.71
TraesCS1D01G082600.1	Wheat	cytosol	56.94	51.93
TraesCS1B01G098700.2	Wheat	cytosol	56.71	51.72
Zm00001d024762_P001	Maize	cytosol	56.24	51.62
TraesCS1B01G098600.1	Wheat	cytosol	56.47	51.5
TraesCS1D01G082200.1	Wheat	cytosol	56.24	51.4
TraesCS1A01G080500.2	Wheat	cytosol	56.47	51.39
TraesCS1A01G080600.1	Wheat	cytosol	56.24	51.29
TraesCS1A01G080700.1	Wheat	cytosol	56.47	50.96
Zm00001d022272_P002	Maize	cytosol	56.94	50.73
Zm00001d006944_P001	Maize	cytosol	56.47	50.21
TraesCS1D01G082500.1	Wheat	cytosol	56.71	50.21
CDY37992	Canola	cytosol	46.59	49.75
HORVU1Hr1G017380.4	Barley	cytosol	56.71	48.69
HORVU1Hr1G017240.4	Barley	cytosol	56.24	48.58
CDX90013	Canola	cytosol	50.82	48.32
CDY15197	Canola	cytosol	50.82	48.32
CDY32442	Canola	cytosol	50.12	47.87
CDY25896	Canola	cytosol	45.65	46.63
CDY26276	Canola	mitochondrion	50.59	46.44
CDX77058	Canola	cytosol, mitochondrion	47.76	46.14
CDY48189	Canola	cytosol, mitochondrion	47.76	46.14
CDY63182	Canola	mitochondrion	50.59	46.04
CDY16600	Canola	cytosol	47.53	45.91
CDX92400	Canola	cytosol	47.53	45.8
CDX90240	Canola	plastid	51.29	45.7
CDX88633	Canola	cytosol	43.76	45.26
CDY09107	Canola	cytosol	46.82	45.12
CDY11858	Canola	cytosol	45.18	44.86
CDX77603	Canola	plastid	50.82	44.81
CDX98191	Canola	plastid	50.59	44.51
CDY36813	Canola	cytosol	47.06	44.15
CDY44603	Canola	cytosol	46.35	43.49
CDY68878	Canola	cytosol, plastid	45.18	43.05
CDY49727	Canola	cytosol	40.0	42.93
CDY03449	Canola	cytosol	45.18	42.38
CDY68292	Canola	nucleus	20.71	37.93
CDY49976	Canola	cytosol	28.24	30.77
CDX97762	Canola	cytosol	33.65	28.95
CDX74460	Canola	cytosol	33.65	28.95
CDX74283	Canola	cytosol	33.88	28.74
CDY43267	Canola	cytosol	33.65	28.26
CDY37545	Canola	cytosol	33.65	28.26
CDY55800	Canola	cytosol	33.88	28.18
CDY34697	Canola	cytosol	33.88	28.18
CDY04058	Canola	cytosol	33.18	27.76
CDX85250	Canola	cytosol	33.41	27.73
CDY44405	Canola	cytosol	33.41	27.68
CDX86386	Canola	cytosol	33.41	27.68
CDX91963	Canola	plasma membrane	33.65	11.53

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	EnsemblPlants:CDX93655	ProteinID:CDX93655	ProteinID:CDX93655.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00156342001	InterPro:IPR000719	InterPro:IPR001772	InterPro:IPR018451	InterPro:KA1_dom	InterPro:Kinase-like_dom_sf
InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF02149	PFAM:PF03822	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR24343	PANTHER:PTHR24343:SF143
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0003D91BA7
GO:V9LYF6	UniProt:V9LYF6	:	:	:	:

Description

BnaA06g03930DNon-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:V9LYF6]

Coordinates

chrLK031876:-:1161651..1165859

Molecular Weight (calculated)

47313.2 Da

IEP (calculated)

7.786

GRAVY (calculated)

-0.194

Length

425 amino acids

Sequence
(BLAST)

001: MVTKGMRVGK YELGRTLGEG NSAKVKLATD TVSGQSFAVK IIDKSSIKRL NVSFQIKREI RTLKVLKHPN IVRLHEVLAS KTKIYMVLEC VTGGDLFDRV
101: VSRGKLSETE GRTLFQQLID GVSYCHNKGV FHRDLKLENV LLDAKGDIKI TDFGLSALPQ HFREDGLLHT TCGSPNYVAP EVLANKGYDG AASDIWSCGV
201: ILYVILTGCL PFDDANLAVL CRNIFKGDPP IPRWLSPGAK TMIKRMLDPN PITRITIAGI KANDWFNHDY TPSSSDDEND ACSFQEDVSE EEKSPDSPTV
301: INAFELIGMS SFLDLSGLFE TEKVLDRQIR FTSNRLAIDV LEKIKTTLME MGFSVQKKHT MLKAIQQESS RKGQSGLSLT AEVFEIIPLL NVVELRKTHG
401: DSLLYKQLCD RLSNELSTSS HVQKL

Best Arabidopsis Sequence Match ( AT1G48260.1 )
(BLAST)

001: MVIKGMRVGK YELGRTLGEG NSAKVKFAID TLTGESFAIK IIEKSCITRL NVSFQIKREI RTLKVLKHPN IVRLHEVLAS KTKIYMVLEC VTGGDLFDRI
101: VSKGKLSETQ GRKMFQQLID GVSYCHNKGV FHRDLKLENV LLDAKGHIKI TDFGLSALSQ HYREDGLLHT TCGSPNYVAP EVLANEGYDG AASDIWSCGV
201: ILYVILTGCL PFDDANLAVI CRKIFKGDPP IPRWISLGAK TMIKRMLDPN PVTRVTIAGI KAHDWFKHDY TPSNYDDDDD VYLIQEDVFM MKEYEEEKSP
301: DSPTIINAFQ LIGMSSFLDL SGFFETEKLS ERQIRFTSNS LAKDLLENIE TIFTEMGFCL QKKHAKLKAI KEESTQKRQC GLSVTAEVFE ISPSLNVVEL
401: RKSHGDSSLY KQLYERLLNE LGSSSQVQEL LA

Arabidopsis Description

CIPK17CBL-interacting serine/threonine-protein kinase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q94C40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.