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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74283 Canola cytosol 37.82 93.61
CDY37545 Canola cytosol 35.73 87.55
CDY43267 Canola cytosol 35.65 87.35
CDY55800 Canola cytosol 35.97 87.28
CDY34697 Canola cytosol 35.89 87.08
AT3G01090.2 Thale cress cytosol 35.81 82.99
KRH01228 Soybean cytosol, nucleus 32.66 78.79
KRH44934 Soybean cytosol, endoplasmic reticulum, nucleus 32.1 78.04
KRH18445 Soybean cytosol, endoplasmic reticulum 32.26 77.67
Solyc02g067030.2.1 Tomato cytosol, nucleus 31.85 76.85
VIT_14s0108g01230.t01 Wine grape cytosol 31.61 76.26
CDY44405 Canola cytosol 30.97 74.85
CDY04058 Canola cytosol 30.56 74.61
CDX86386 Canola cytosol 30.81 74.46
CDX85250 Canola cytosol 30.73 74.41
GSMUA_AchrUn_... Banana cytosol, plasma membrane 27.18 73.58
EES01406 Sorghum cytosol 29.44 73.15
Os05t0530500-02 Rice cytosol, plasma membrane 29.52 72.48
TraesCS1D01G353300.1 Wheat cytosol 29.11 72.2
TraesCS1B01G364800.1 Wheat cytosol 29.11 72.2
TraesCS1A01G350500.1 Wheat cytosol 29.11 71.77
EES19859 Sorghum cytosol 29.03 71.43
Zm00001d005108_P003 Maize cytosol 28.87 71.17
TraesCS3A01G282800.1 Wheat cytosol 28.79 70.97
TraesCS3D01G282800.1 Wheat cytosol 28.79 70.97
TraesCS3B01G316500.1 Wheat cytosol 28.71 70.78
HORVU1Hr1G081310.4 Barley cytosol 29.19 69.62
GSMUA_Achr10P... Banana cytosol 32.82 65.65
PGSC0003DMT400063153 Potato cytosol 26.05 64.09
HORVU3Hr1G069190.1 Barley cytosol, plastid 29.27 63.57
Bra021482.1-P Field mustard cytosol 31.05 60.34
CDX97762 Canola cytosol 23.87 59.92
CDX74460 Canola cytosol 23.87 59.92
Zm00001d010811_P002 Maize cytosol 32.66 54.66
CDY37992 Canola cytosol 12.18 37.94
Zm00001d038745_P002 Maize cytosol 25.16 37.19
CDX77058 Canola cytosol, mitochondrion 12.42 35.0
CDY48189 Canola cytosol, mitochondrion 12.42 35.0
CDX90013 Canola cytosol 12.58 34.9
CDY15197 Canola cytosol 12.58 34.9
CDY16600 Canola cytosol 12.34 34.77
CDX92400 Canola cytosol 12.34 34.69
CDX75921 Canola cytosol 12.42 34.68
CDY32442 Canola cytosol 12.42 34.61
CDX82366 Canola cytosol 12.34 34.54
CDY68878 Canola cytosol, plastid 12.42 34.53
CDY41846 Canola cytosol 11.61 34.45
CDX92136 Canola cytosol 12.34 34.3
CDY43284 Canola cytosol 11.69 34.04
CDY03449 Canola cytosol 12.42 34.0
CDY43285 Canola cytosol 11.61 33.88
CDX93653 Canola cytosol 11.61 33.88
CDY25896 Canola cytosol 11.29 33.65
CDX93655 Canola cytosol 11.53 33.65
CDX88633 Canola cytosol 11.13 33.58
CDY49727 Canola cytosol 10.65 33.33
CDY26276 Canola mitochondrion 12.34 33.05
CDY11858 Canola cytosol 11.37 32.94
CDY63182 Canola mitochondrion 12.34 32.76
CDX95849 Canola plasma membrane 12.34 32.76
CDX90240 Canola plastid 12.58 32.7
CDY09107 Canola cytosol 11.61 32.65
CDY44603 Canola cytosol 11.77 32.23
CDY23677 Canola cytosol 10.32 32.08
CDX77603 Canola plastid 12.42 31.95
CDX98191 Canola plastid 12.42 31.88
CDY36813 Canola cytosol 11.53 31.57
CDY49976 Canola cytosol 6.85 21.79
CDY68292 Canola nucleus 3.71 19.83
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.1.1MapMan:24.3.7MapMan:27.3.1.1Gene3D:3.30.310.80GO:A0A078DXG3EnsemblPlants:CDX91963
ProteinID:CDX91963ProteinID:CDX91963.1ncoils:CoilInterPro:Csc1_NGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00153604001InterPro:IPR000719InterPro:IPR001772InterPro:IPR015940
InterPro:KA1/Ssp2_CInterPro:KA1_domInterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF02149PFAM:PF02714
PFAM:PF13967PFAM:PF14703InterPro:PHM7_cytScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50030PFscan:PS50032PANTHER:PTHR13018PANTHER:PTHR13018:SF32InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
InterPro:RSN1_7TMSMART:SM00165SMART:SM00220SUPFAM:SSF103243SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelixInterPro:UBAUniParc:UPI0004EEFE3FSEG:seg::
Description
BnaC03g32650D
Coordinates
chrLK031870:+:1009141..1015468
Molecular Weight (calculated)
140638.0 Da
IEP (calculated)
9.030
GRAVY (calculated)
0.086
Length
1240 amino acids
Sequence
(BLAST)
0001: MILSALLTSV GINLGLCFLF FTLYSILRKQ PGNVTVYGPR LIQDGRSQEE TNAFNLERLL PTAGWVRRAL EPTNEDILSN LGLDALVFIR VLVFSIRVFS
0101: FASVVGIFIL LPVNYMGTEF EEFFDLPKKS LDSFSISNVN DGSNKLWIHF SAIYIFTAVV CYLLYCEHKY LSSKRIDHFY SSKPQPHEFT VLVSGVPVVS
0201: GNSISETVES FFREYHSSTY LSHVVVHRTD KLKALMNDAE KLYKKLTRVK SGSISRQKSM RDGFLGMFGK KVDVVDHYEK KLEKLEDDMR LKQSLLAGEE
0301: VPAAFVSFRT RHGAAIATNI QQGIDPTQWL TEPAPEPQDV HWPFFTASFV RRWISNVVVF VAFVALIILY VIPVVLVQGL ANLHQLETWF PFLKSILNIK
0401: VVSQVITGYL PSLIYQLFLM IVPPIMLLLS SMQGYISHSQ IEKSACIKLL VFTIWNSFFA NVLSGSALYR VNVFLEPKNI PRVLAAAVPA QASFFISYVV
0501: TSGWTGLSSE IFRLVPLIWN FVMKLFGKED DKEFEVPPTP FCQEITSILF FGLLGTTYFF LSPLILPFLL VYFCLGYVIY RNQLLNVYAA KYETGGKFWP
0601: IVHNSTIFSL VLMHVIAIGI FGLKELPLAS SLTIPLPILT VLFSIYCQRR FLANFKSYPT ECLVNKDKAD AREQNKSEFY AKLVVAYRDP AVSASRYARG
0701: ISLEDPPLLL KTQSVSSFNR WKKTLNRLPC ALKMDGSGGR GGVESILQNY KLGRVLGIGS FGKVKIAEHT LTGHNVAIKI ISRRRIKNME MEEKVRREIK
0801: IMSLFMHPHI IRLYEVIETT TDIYLVMEYV NSGELFDYIA EKGRLQEDEA RKFFQQIISG VEYCHRNMVV HRDLKPENLL LESKCNVKIA DFGLSNVMRD
0901: GHFLKTSCGS PNYAAPEVIS GKLYAGPEVD VWSCGVILYA LLCGTLPFDD ENLSNLYKKI KGGIYTLPSH LSAGARDLIP KMLVVDPLKR VTIPEIRQHH
1001: WFQPNLPSYL AVPPPDTAQQ AKKIDEEILQ EVINVGFDRN HLIVSLRNRI QNDGTVTYYL ILDNRFRGFG GYLRAGFQET MDGTSRMHPA ESVASHVRLP
1101: GLMELQGVGL RSQYPVERNW ALGLQSRAHP REIMTEVLKA LQDLNVRWKK MGPYNIKCRW VPNNAGGMLS NSMHDNSYLG HDSSMIENDA VVMSPNVVKF
1201: ETQLYKTQDG KYLLDLQRVH GAQFLFLELC AAFLTQLRVL
Best Arabidopsis Sequence Match ( AT3G01100.1 )
(BLAST)
001: MLLSALLTSV GINLGLCFLF FTLYSILRKQ PSNVTVYGPR LVKKDGKSQQ SNEFNLERLL PTAGWVKRAL EPTNDEILSN LGLDALVFIR VFVFSIRVFS
101: FASVVGIFIL LPVNYMGTEF EEFFDLPKKS MDNFSISNVN DGSNKLWIHF CAIYIFTAVV CSLLYYEHKY ILTKRIAHLY SSKPQPQEFT VLVSGVPLVS
201: GNSISETVEN FFREYHSSSY LSHIVVHRTD KLKVLMNDAE KLYKKLTRVK SGSISRQKSR WGGFLGMFGN NVDVVDHYQK KLDKLEDDMR LKQSLLAGEE
301: VPAAFVSFRT RHGAAIATNI QQGIDPTQWL TEAAPEPEDV HWPFFTASFV RRWISNVVVL VAFVALLILY IVPVVLVQGL ANLHQLETWF PFLKGILNMK
401: IVSQVITGYL PSLIFQLFLL IVPPIMLLLS SMQGFISHSQ IEKSACIKLL IFTVWNSFFA NVLSGSALYR VNVFLEPKTI PRVLAAAVPA QASFFVSYVV
501: TSGWTGLSSE ILRLVPLLWS FITKLFGKED DKEFEVPSTP FCQEIPRILF FGLLGITYFF LSPLILPFLL VYYCLGYIIY RNQLLNVYAA KYETGGKFWP
601: IVHSYTIFSL VLMHIIAVGL FGLKELPVAS SLTIPLPVLT VLFSIYCQRR FLPNFKSYPT QCLVNKDKAD EREQNMSEFY SELVVAYRDP ALSASQDSRD
701: ISP
Arabidopsis Description
HYP1hypothetical protein 1 [Source:TAIR;Acc:AT3G01100]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.