Factsheet for TraesCS3D01G296000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G215800.1
TraesCS1B01G229300.1
TraesCS4A01G151000.2
TraesCS4A01G245500.1
TraesCS4A01G268700.1
TraesCS4B01G045500.2
TraesCS4B01G069900.1
TraesCS4B01G159900.1
TraesCS4B01G379200.1
TraesCS4D01G046400.2
TraesCS4D01G068700.1
TraesCS4D01G155900.1
TraesCS5A01G060600.1
TraesCS5A01G545500.2
TraesCS5B01G071500.1
TraesCS5D01G072100.1
TraesCSU01G129500.1
TraesCSU01G178500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G29230.1	TraesCS1A01G215800.1	AT5G47100.1	14730064
AT1G29230.1	TraesCS1B01G229300.1	AT5G47100.1	14730064
AT1G29230.1	TraesCS4B01G379200.1	AT5G47100.1	14730064
AT1G29230.1	TraesCS5A01G545500.2	AT5G47100.1	14730064
AT1G29230.1	TraesCSU01G129500.1	AT5G47100.1	14730064
AT1G29230.1	TraesCSU01G178500.1	AT5G47100.1	14730064
AT1G29230.1	TraesCS1A01G215800.1	AT5G47100.1	14730130
AT1G29230.1	TraesCS1B01G229300.1	AT5G47100.1	14730130
AT1G29230.1	TraesCS4B01G379200.1	AT5G47100.1	14730130
AT1G29230.1	TraesCS5A01G545500.2	AT5G47100.1	14730130
AT1G29230.1	TraesCSU01G129500.1	AT5G47100.1	14730130
AT1G29230.1	TraesCSU01G178500.1	AT5G47100.1	14730130
AT1G29230.1	TraesCS4A01G245500.1	AT5G55990.1	14730130
AT1G29230.1	TraesCS4B01G069900.1	AT5G55990.1	14730130
AT1G29230.1	TraesCS4D01G068700.1	AT5G55990.1	14730130
AT1G29230.1	TraesCS5A01G060600.1	AT5G55990.1	14730130
AT1G29230.1	TraesCS5B01G071500.1	AT5G55990.1	14730130
AT1G29230.1	TraesCS5D01G072100.1	AT5G55990.1	14730130
AT2G34180.1	TraesCS4A01G245500.1	AT5G55990.1	11230129
AT2G34180.1	TraesCS4B01G069900.1	AT5G55990.1	11230129
AT2G34180.1	TraesCS4D01G068700.1	AT5G55990.1	11230129
AT2G34180.1	TraesCS5A01G060600.1	AT5G55990.1	11230129
AT2G34180.1	TraesCS5B01G071500.1	AT5G55990.1	11230129
AT2G34180.1	TraesCS5D01G072100.1	AT5G55990.1	11230129
AT2G34180.1	TraesCS4A01G245500.1	AT5G55990.1	14730130
AT2G34180.1	TraesCS4B01G069900.1	AT5G55990.1	14730130
AT2G34180.1	TraesCS4D01G068700.1	AT5G55990.1	14730130
AT2G34180.1	TraesCS5A01G060600.1	AT5G55990.1	14730130
AT2G34180.1	TraesCS5B01G071500.1	AT5G55990.1	14730130
AT2G34180.1	TraesCS5D01G072100.1	AT5G55990.1	14730130
AT4G18700.1	TraesCS4A01G151000.2	AT5G38480.1	21798944
AT4G18700.1	TraesCS4A01G268700.1	AT5G38480.1	21798944
AT4G18700.1	TraesCS4B01G045500.2	AT5G38480.1	21798944
AT4G18700.1	TraesCS4B01G159900.1	AT5G38480.1	21798944
AT4G18700.1	TraesCS4D01G046400.2	AT5G38480.1	21798944
AT4G18700.1	TraesCS4D01G155900.1	AT5G38480.1	21798944
AT4G18700.1	TraesCS1A01G215800.1	AT5G47100.1	14730064
AT4G18700.1	TraesCS1B01G229300.1	AT5G47100.1	14730064
AT4G18700.1	TraesCS4B01G379200.1	AT5G47100.1	14730064
AT4G18700.1	TraesCS5A01G545500.2	AT5G47100.1	14730064
AT4G18700.1	TraesCSU01G129500.1	AT5G47100.1	14730064
AT4G18700.1	TraesCSU01G178500.1	AT5G47100.1	14730064
AT4G18700.1	TraesCS4A01G245500.1	AT5G55990.1	11230129
AT4G18700.1	TraesCS4B01G069900.1	AT5G55990.1	11230129
AT4G18700.1	TraesCS4D01G068700.1	AT5G55990.1	11230129
AT4G18700.1	TraesCS5A01G060600.1	AT5G55990.1	11230129
AT4G18700.1	TraesCS5B01G071500.1	AT5G55990.1	11230129
AT4G18700.1	TraesCS5D01G072100.1	AT5G55990.1	11230129
AT4G18700.1	TraesCS4A01G245500.1	AT5G55990.1	14730130
AT4G18700.1	TraesCS4B01G069900.1	AT5G55990.1	14730130
AT4G18700.1	TraesCS4D01G068700.1	AT5G55990.1	14730130
AT4G18700.1	TraesCS5A01G060600.1	AT5G55990.1	14730130
AT4G18700.1	TraesCS5B01G071500.1	AT5G55990.1	14730130
AT4G18700.1	TraesCS5D01G072100.1	AT5G55990.1	14730130
AT4G18700.1	TraesCS4A01G245500.1	AT5G55990.1	21798944
AT4G18700.1	TraesCS4B01G069900.1	AT5G55990.1	21798944
AT4G18700.1	TraesCS4D01G068700.1	AT5G55990.1	21798944
AT4G18700.1	TraesCS5A01G060600.1	AT5G55990.1	21798944
AT4G18700.1	TraesCS5B01G071500.1	AT5G55990.1	21798944
AT4G18700.1	TraesCS5D01G072100.1	AT5G55990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G330600.1	Wheat	plastid	97.45	65.52
TraesCS3A01G305900.1	Wheat	plastid	96.6	65.33
HORVU3Hr1G073100.2	Barley	cytosol	94.9	58.16
EES03646	Sorghum	plastid	73.37	49.9
Zm00001d012696_P001	Maize	plastid	68.84	47.0
Zm00001d043389_P003	Maize	cytosol, plastid	72.8	46.9
Os01t0759400-02	Rice	cytosol, plastid	71.39	46.67
VIT_10s0003g01420.t01	Wine grape	cytosol	58.36	43.83
Solyc02g072530.1.1	Tomato	cytosol	56.37	41.63
PGSC0003DMT400073132	Potato	cytosol	56.09	41.42
CDX78885	Canola	cytosol	54.11	40.9
AT4G18700.1	Thale cress	cytosol	56.37	40.7
CDX99438	Canola	cytosol	53.54	40.38
Bra013340.1-P	Field mustard	cytosol	56.37	40.28
Bra020996.1-P	Field mustard	cytosol	55.24	39.96
CDY69878	Canola	cytosol	48.73	39.91
KRH21248	Soybean	cytosol	57.51	39.65
KRH11038	Soybean	cytosol	57.22	39.61
CDY17228	Canola	cytosol, mitochondrion, plastid	51.56	38.89
KRH58970	Soybean	cytosol	54.96	37.52
AT5G45810.1	Thale cress	cytosol	51.27	37.47
Bra005447.1-P	Field mustard	cytosol, mitochondrion, plastid	52.12	37.4
CDY70469	Canola	cytosol	50.71	37.29
CDY43329	Canola	cytosol	54.39	37.28
AT2G34180.1	Thale cress	plastid	52.97	37.25
Bra005446.1-P	Field mustard	mitochondrion	51.27	37.24
Bra025052.1-P	Field mustard	cytosol	50.71	37.21
CDY67391	Canola	cytosol	50.42	37.16
KRH42869	Soybean	cytosol	55.52	37.12
CDY67623	Canola	cytosol	47.59	37.09
AT1G29230.1	Thale cress	cytosol, plastid	54.39	36.92
CDY37668	Canola	vacuole	52.12	36.73
Bra010841.1-P	Field mustard	cytosol, plastid	54.39	36.64
CDX90179	Canola	cytosol, plastid	54.39	36.64
CDY63139	Canola	cytosol	49.29	36.55
Bra021897.1-P	Field mustard	plastid	52.69	36.33
CDY68813	Canola	mitochondrion	47.88	36.27
CDY68616	Canola	cytosol, mitochondrion	47.59	36.05
TraesCS5D01G232500.1	Wheat	cytosol	36.54	33.08
TraesCS3D01G151500.1	Wheat	cytosol, mitochondrion	40.79	31.03
TraesCS3D01G136700.1	Wheat	mitochondrion	45.04	30.58
CDY34052	Canola	cytosol	41.36	28.85
TraesCS2D01G106800.1	Wheat	cytosol	36.26	28.07
TraesCS4D01G118500.2	Wheat	cytosol	35.41	27.84
TraesCS4D01G113100.1	Wheat	cytosol	34.28	27.56
TraesCS3D01G295900.1	Wheat	cytosol	37.11	27.46
TraesCS5D01G144800.1	Wheat	cytosol	33.43	26.94
TraesCS6D01G124200.1	Wheat	cytosol	36.83	26.75
TraesCS1D01G298500.1	Wheat	cytosol	35.69	26.69
TraesCS4D01G170700.1	Wheat	cytosol	32.86	26.48
TraesCS5D01G232600.1	Wheat	cytosol	31.44	24.83
TraesCS3D01G339800.1	Wheat	cytosol	34.56	24.06

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
Gene3D:3.30.310.80	MapMan:50.2.7	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom
PFAM:PF00069	PFAM:PF03822	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF6
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G296000	EnsemblPlants:TraesCS3D01G296000.1
TIGR:cd12195	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:409020562..409022118

Molecular Weight (calculated)

39280.0 Da

IEP (calculated)

5.058

GRAVY (calculated)

-0.319

Length

353 amino acids

Sequence
(BLAST)

001: MAAIKPPPPD RPPQAARLPS PSSSSSAAEP FQPEGLLHTF CGTPAYVAPE VLARRGYEGA KADIWSCGVI LFVLMAGYLP FHDQNLMAMY RKVYKGEFRC
101: PRWFSKDLTS LIMRFLDTNP STRITLPEVM ESRWFKKGFR PVKFYIEDDQ LYNVIDAEND MLDLGLPDPL PQPLLPPPSS PSPQEVDGDD SGSESDASVV
201: SCPATSSFEE RHRLRGPLPR PASLNAFDII SFSRGFNLSG LFEEKGDEVR FISSEPMSGI ITKLEEIANV KSFAVRKKDW RVSLEGTREG VKGPLTICAE
301: IFELTPSLVV VEVKKKAGDK EEYDDFCNKE LKPGMQHLVH QMAPVPITPT ISE

Best Arabidopsis Sequence Match ( AT1G29230.1 )
(BLAST)

001: MAQALAQPPL VVTTVVPDPP PPPPPPHPKP YALRYMADLL GRIGIMDTDK DGNISPQSPR SPRSPRNNIL MGKYELGKLL GHGTFAKVYL AQNIKSGDKV
101: AIKVIDKEKI MKSGLVAHIK REISILRRVR HPYIVHLFEV MATKSKIYFV MEYVGGGELF NTVAKGRLPE ETARRYFQQL ISSVSFCHGR GVYHRDLKPE
201: NLLLDNKGNL KVSDFGLSAV AEQLRQDGLC HTFCGTPAYI APEVLTRKGY DAAKADVWSC GVILFVLMAG HIPFYDKNIM VMYKKIYKGE FRCPRWFSSD
301: LVRLLTRLLD TNPDTRITIP EIMKNRWFKK GFKHVKFYIE DDKLCREDED EEEEASSSGR SSTVSESDAE FDVKRMGIGS MPRPSSLNAF DIISFSSGFD
401: LSGLFEEEGG EGTRFVSGAP VSKIISKLEE IAKIVSFTVR KKEWSLRLEG CREGAKGPLT IAAEIFELTP SLVVVEVKKK GGDREEYEEF CNKELRPELE
501: KLIHEEVVVE EALYLPSDTE

Arabidopsis Description

CIPK18Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WD98]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.