Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH42869 | Soybean | cytosol | 94.78 | 92.8 |
CDY69878 | Canola | cytosol | 64.6 | 77.49 |
VIT_10s0003g01420.t01 | Wine grape | cytosol | 70.02 | 77.02 |
KRH11038 | Soybean | cytosol | 75.05 | 76.08 |
CDX78885 | Canola | cytosol | 68.09 | 75.37 |
KRH21248 | Soybean | cytosol | 74.27 | 75.0 |
CDX99438 | Canola | cytosol | 66.92 | 73.93 |
AT4G18700.1 | Thale cress | cytosol | 69.25 | 73.21 |
Bra020996.1-P | Field mustard | cytosol | 68.47 | 72.54 |
Bra013340.1-P | Field mustard | cytosol | 69.05 | 72.27 |
Solyc02g072530.1.1 | Tomato | cytosol | 66.73 | 72.18 |
PGSC0003DMT400073132 | Potato | cytosol | 66.54 | 71.97 |
CDY67623 | Canola | cytosol | 62.48 | 71.3 |
CDY70469 | Canola | cytosol | 64.41 | 69.38 |
Bra025052.1-P | Field mustard | cytosol | 64.22 | 69.02 |
GSMUA_Achr6P14530_001 | Banana | cytosol, mitochondrion | 53.38 | 68.83 |
AT5G45810.1 | Thale cress | cytosol | 64.02 | 68.53 |
HORVU6Hr1G054210.3 | Barley | cytosol | 57.45 | 67.81 |
Zm00001d038690_P001 | Maize | cytosol | 61.51 | 63.22 |
Os05t0514200-01 | Rice | cytosol, plastid | 61.51 | 62.6 |
OQU78296 | Sorghum | plastid | 61.12 | 62.45 |
HORVU1Hr1G076910.3 | Barley | cytosol, plastid | 61.32 | 62.16 |
Zm00001d010743_P001 | Maize | cytosol, plastid | 60.73 | 61.69 |
TraesCS1B01G347100.1 | Wheat | plastid | 61.32 | 61.08 |
TraesCS1A01G333800.1 | Wheat | plastid | 61.32 | 60.84 |
EES03646 | Sorghum | plastid | 60.54 | 60.31 |
TraesCS3A01G305900.1 | Wheat | plastid | 60.73 | 60.15 |
CDY34052 | Canola | cytosol | 58.22 | 59.49 |
TraesCS3B01G330600.1 | Wheat | plastid | 59.96 | 59.05 |
Zm00001d012696_P001 | Maize | plastid | 57.45 | 57.45 |
Zm00001d043389_P003 | Maize | cytosol, plastid | 60.35 | 56.93 |
KRH03068 | Soybean | cytosol | 46.03 | 56.4 |
EES02274 | Sorghum | cytosol | 55.9 | 56.23 |
Os01t0206300-00 | Rice | cytosol | 55.32 | 55.97 |
KRH12907 | Soybean | cytosol | 47.39 | 55.94 |
Os01t0759400-02 | Rice | cytosol, plastid | 58.41 | 55.93 |
KRH72285 | Soybean | cytosol | 46.23 | 55.58 |
KRH76102 | Soybean | cytosol | 50.1 | 55.46 |
HORVU3Hr1G025810.1 | Barley | cytosol | 54.74 | 55.38 |
KRH37909 | Soybean | cytosol | 47.0 | 55.23 |
Zm00001d008899_P001 | Maize | cytosol | 54.93 | 55.15 |
TraesCS3D01G296000.1 | Wheat | plastid | 37.52 | 54.96 |
TraesCS3B01G153800.1 | Wheat | mitochondrion | 55.13 | 54.91 |
HORVU3Hr1G073100.2 | Barley | cytosol | 61.12 | 54.86 |
TraesCS3D01G136700.1 | Wheat | mitochondrion | 55.13 | 54.81 |
KRH17163 | Soybean | cytosol | 46.42 | 54.67 |
TraesCS3A01G135700.1 | Wheat | mitochondrion | 54.93 | 54.41 |
KRH40770 | Soybean | cytosol | 48.36 | 54.35 |
KRH00415 | Soybean | cytosol | 48.16 | 53.9 |
KRH65452 | Soybean | cytosol | 42.94 | 53.75 |
KRG97651 | Soybean | cytosol | 46.62 | 53.67 |
KRH72812 | Soybean | cytosol | 45.65 | 53.39 |
KRH31221 | Soybean | cytosol | 46.42 | 53.1 |
KRG98160 | Soybean | cytosol | 45.84 | 52.67 |
KRG94820 | Soybean | cytosol | 43.71 | 52.56 |
KRH21249 | Soybean | cytosol | 45.84 | 52.55 |
KRH72808 | Soybean | cytosol | 46.81 | 52.27 |
KRH40763 | Soybean | cytosol | 44.1 | 52.05 |
KRH18584 | Soybean | cytosol | 45.84 | 51.97 |
KRH00424 | Soybean | cytosol | 44.49 | 51.92 |
KRG98172 | Soybean | cytosol | 46.03 | 51.52 |
KRH61670 | Soybean | mitochondrion | 42.94 | 51.15 |
KRH30131 | Soybean | cytosol | 45.45 | 50.87 |
KRH52332 | Soybean | cytosol | 44.1 | 50.33 |
KRH44558 | Soybean | cytosol | 41.2 | 49.53 |
KRH47346 | Soybean | cytosol | 41.59 | 48.75 |
KRH09653 | Soybean | cytosol | 43.33 | 48.59 |
KRH23642 | Soybean | cytosol, nucleus, plastid | 37.52 | 45.65 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr5:+:35076361..35078476
Molecular Weight (calculated)
58421.0 Da
IEP (calculated)
7.551
GRAVY (calculated)
-0.349
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVAPPKKE NPNLLLGRFE LGKLLGHGTF AKVHHARNIK TGEGVAIKII NKEKILKGGL VSHIKREISI LRRVRHPNIV QLFEVMATKT KIYFVMEYVR
101: GGELFNKVAK GRLKEEVARN YFQQLVSAVE FCHARGVFHR DLKPENLLLD EDGNLKVSDF GLSAVSDQIR QDGLFHTFCG TPAYVAPEVL SRKGYDGAKV
201: DIWSCGVVLF VLMAGYLPFN DRNVMAMYKK IYKGEFRCPR WFSSELTRLL SRLLDTNPQT RISIPEVMEN RWFKKGFKQI KFYVEDDRVC SFDEKLLLHH
301: DDDLATSDSE VEIRRKNSNG SLPRPASLNA FDIISFSQGF DLSGLFEEKG DEARFVSSAP VSKIISKLEE VAQLVSFSVR KKDCRVSLEG CREGVKGPLT
401: IAAEVFELTP SLVVVEVKKK GGDKAEYEKF CNSELRPALE NLGMEESASS SSSCHQSTHT QSEFQQHRTL SDSALNRHSD NECLFERELG LADETSISQH
501: GESKFECQQE NMAMFTI
101: GGELFNKVAK GRLKEEVARN YFQQLVSAVE FCHARGVFHR DLKPENLLLD EDGNLKVSDF GLSAVSDQIR QDGLFHTFCG TPAYVAPEVL SRKGYDGAKV
201: DIWSCGVVLF VLMAGYLPFN DRNVMAMYKK IYKGEFRCPR WFSSELTRLL SRLLDTNPQT RISIPEVMEN RWFKKGFKQI KFYVEDDRVC SFDEKLLLHH
301: DDDLATSDSE VEIRRKNSNG SLPRPASLNA FDIISFSQGF DLSGLFEEKG DEARFVSSAP VSKIISKLEE VAQLVSFSVR KKDCRVSLEG CREGVKGPLT
401: IAAEVFELTP SLVVVEVKKK GGDKAEYEKF CNSELRPALE NLGMEESASS SSSCHQSTHT QSEFQQHRTL SDSALNRHSD NECLFERELG LADETSISQH
501: GESKFECQQE NMAMFTI
001: MAEKITRETS LPKERSSPQA LILGRYEMGK LLGHGTFAKV YLARNVKTNE SVAIKVIDKE KVLKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE
Arabidopsis Description
CIPK12CBL-interacting serine/threonine-protein kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN43]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.