Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH00424 | Soybean | cytosol | 91.1 | 90.07 |
Solyc10g085450.1.1 | Tomato | cytosol | 42.24 | 61.06 |
KRH17163 | Soybean | cytosol | 55.94 | 55.81 |
KRH72812 | Soybean | cytosol | 54.34 | 53.85 |
PGSC0003DMT400028840 | Potato | cytosol | 52.51 | 52.75 |
VIT_08s0058g01090.t01 | Wine grape | cytosol | 55.25 | 52.72 |
KRG98160 | Soybean | cytosol | 53.42 | 52.0 |
GSMUA_Achr9P04780_001 | Banana | cytosol | 42.01 | 51.69 |
KRH18584 | Soybean | cytosol | 53.65 | 51.54 |
Solyc09g018280.1.1 | Tomato | cytosol | 52.05 | 51.47 |
PGSC0003DMT400056629 | Potato | cytosol | 52.74 | 51.33 |
AT2G38490.1 | Thale cress | cytosol | 50.0 | 50.81 |
GSMUA_Achr8P01770_001 | Banana | cytosol | 39.73 | 50.73 |
CDX91471 | Canola | cytosol | 49.09 | 50.35 |
Bra000066.1-P | Field mustard | cytosol | 49.32 | 50.23 |
Bra005103.1-P | Field mustard | cytosol | 48.86 | 50.12 |
CDY65565 | Canola | cytosol | 48.86 | 50.12 |
CDY07727 | Canola | cytosol | 49.09 | 50.0 |
CDY14457 | Canola | cytosol | 48.63 | 49.53 |
GSMUA_Achr6P32570_001 | Banana | cytosol | 39.5 | 47.14 |
KRH03068 | Soybean | cytosol | 44.29 | 45.97 |
KRH72285 | Soybean | cytosol | 44.75 | 45.58 |
KRH11038 | Soybean | cytosol | 51.6 | 44.31 |
KRH58970 | Soybean | cytosol | 52.05 | 44.1 |
KRH37909 | Soybean | cytosol | 44.29 | 44.09 |
KRH12907 | Soybean | cytosol | 44.06 | 44.06 |
KRH21248 | Soybean | cytosol | 51.14 | 43.75 |
KRH21249 | Soybean | cytosol | 44.75 | 43.46 |
KRH42869 | Soybean | cytosol | 52.28 | 43.37 |
KRH40770 | Soybean | cytosol | 45.43 | 43.26 |
KRH00415 | Soybean | cytosol | 45.43 | 43.07 |
KRH72808 | Soybean | cytosol | 45.21 | 42.76 |
KRG97651 | Soybean | cytosol | 43.61 | 42.54 |
KRH76102 | Soybean | cytosol | 44.98 | 42.18 |
KRH44558 | Soybean | cytosol | 41.1 | 41.86 |
KRH31221 | Soybean | cytosol | 43.15 | 41.81 |
KRG98172 | Soybean | cytosol | 43.84 | 41.56 |
KRG94820 | Soybean | cytosol | 40.64 | 41.4 |
KRH30131 | Soybean | cytosol | 43.15 | 40.91 |
KRH65452 | Soybean | cytosol | 38.36 | 40.68 |
KRH47346 | Soybean | cytosol | 40.87 | 40.59 |
KRH61670 | Soybean | mitochondrion | 40.18 | 40.55 |
KRH52332 | Soybean | cytosol | 41.1 | 39.74 |
KRH09653 | Soybean | cytosol | 39.95 | 37.96 |
KRH23642 | Soybean | cytosol, nucleus, plastid | 34.25 | 35.29 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr9:+:49205614..49207400
Molecular Weight (calculated)
48826.5 Da
IEP (calculated)
6.524
GRAVY (calculated)
-0.153
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVTTEFAAA TNDEEVPSGV VLFGKYELRR LLGAGAFAKV YHATSVDDTR QSVAVKAVSK NKVLNGGFAA NVEREISIMR RLHHPNIINL FEVLATKTKI
101: YFVMEFAAGG ELFHEVAGKV RLTEETARFY FRQLISAVKH CHSRGVFHRD LKLDNLLLDE NGNLKVSDFG LSAVTGQIRP DGLLHTVCGT PTYVAPEILA
201: KKGYDGAKVD LWSCGVVLFA LTAGYLPFND YNPTVLYRKI YRGQFRFPRW MSYDLRFLLS RLLDTNPSTR ITVDEIYKNT WFNAGGGEYR FNRVSVTESE
301: CEKQLGRTGF ESLNAFDLIS FSTGLDMSGL FEDPNGSDSA ERIVSSVAPE EIMERVEAVA EEGRVVVRRE KNGGGAKLEG QDGNLIGIVV VYRLTDELVV
401: VEMKRGEKGG KCGVQFWKDK LCPLLLELTS DLEEPVSR
101: YFVMEFAAGG ELFHEVAGKV RLTEETARFY FRQLISAVKH CHSRGVFHRD LKLDNLLLDE NGNLKVSDFG LSAVTGQIRP DGLLHTVCGT PTYVAPEILA
201: KKGYDGAKVD LWSCGVVLFA LTAGYLPFND YNPTVLYRKI YRGQFRFPRW MSYDLRFLLS RLLDTNPSTR ITVDEIYKNT WFNAGGGEYR FNRVSVTESE
301: CEKQLGRTGF ESLNAFDLIS FSTGLDMSGL FEDPNGSDSA ERIVSSVAPE EIMERVEAVA EEGRVVVRRE KNGGGAKLEG QDGNLIGIVV VYRLTDELVV
401: VEMKRGEKGG KCGVQFWKDK LCPLLLELTS DLEEPVSR
001: MAQALAQPPL VVTTVVPDPP PPPPPPHPKP YALRYMADLL GRIGIMDTDK DGNISPQSPR SPRSPRNNIL MGKYELGKLL GHGTFAKVYL AQNIKSGDKV
101: AIKVIDKEKI MKSGLVAHIK REISILRRVR HPYIVHLFEV MATKSKIYFV MEYVGGGELF NTVAKGRLPE ETARRYFQQL ISSVSFCHGR GVYHRDLKPE
201: NLLLDNKGNL KVSDFGLSAV AEQLRQDGLC HTFCGTPAYI APEVLTRKGY DAAKADVWSC GVILFVLMAG HIPFYDKNIM VMYKKIYKGE FRCPRWFSSD
301: LVRLLTRLLD TNPDTRITIP EIMKNRWFKK GFKHVKFYIE DDKLCREDED EEEEASSSGR SSTVSESDAE FDVKRMGIGS MPRPSSLNAF DIISFSSGFD
401: LSGLFEEEGG EGTRFVSGAP VSKIISKLEE IAKIVSFTVR KKEWSLRLEG CREGAKGPLT IAAEIFELTP SLVVVEVKKK GGDREEYEEF CNKELRPELE
501: KLIHEEVVVE EALYLPSDTE
101: AIKVIDKEKI MKSGLVAHIK REISILRRVR HPYIVHLFEV MATKSKIYFV MEYVGGGELF NTVAKGRLPE ETARRYFQQL ISSVSFCHGR GVYHRDLKPE
201: NLLLDNKGNL KVSDFGLSAV AEQLRQDGLC HTFCGTPAYI APEVLTRKGY DAAKADVWSC GVILFVLMAG HIPFYDKNIM VMYKKIYKGE FRCPRWFSSD
301: LVRLLTRLLD TNPDTRITIP EIMKNRWFKK GFKHVKFYIE DDKLCREDED EEEEASSSGR SSTVSESDAE FDVKRMGIGS MPRPSSLNAF DIISFSSGFD
401: LSGLFEEEGG EGTRFVSGAP VSKIISKLEE IAKIVSFTVR KKEWSLRLEG CREGAKGPLT IAAEIFELTP SLVVVEVKKK GGDREEYEEF CNKELRPELE
501: KLIHEEVVVE EALYLPSDTE
Arabidopsis Description
CIPK18Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WD98]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.