CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRG98442
KRH04244
KRH18664
KRH28207
KRH46425
KRH57533

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G30960.1	KRG89812	AT2G41090.1	17360592
AT4G30960.1	KRG94975	AT2G41090.1	17360592
AT4G30960.1	KRH18664	AT2G41090.1	17360592
AT4G30960.1	KRG89812	AT5G21274.1	17360592
AT4G30960.1	KRG94975	AT5G21274.1	17360592
AT4G30960.1	KRH18664	AT5G21274.1	17360592
AT4G30960.1	KRH04244	AT5G47100.1	17898163
AT4G30960.1	KRH28207	AT5G47100.1	17898163
AT4G30960.1	KRH57533	AT5G47100.1	17898163
AT4G30960.1	KRG98442	AT5G55990.1	11230129
AT4G30960.1	KRH46425	AT5G55990.1	11230129
AT4G30960.1	KRG98442	AT5G55990.1	17898163
AT4G30960.1	KRH46425	AT5G55990.1	17898163
AT4G30960.1	KRG98442	AT5G55990.1	21798944
AT4G30960.1	KRH46425	AT5G55990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72285	Soybean	cytosol	94.08	92.33
KRH12907	Soybean	cytosol	80.09	77.17
KRH37909	Soybean	cytosol	79.38	76.14
VIT_11s0016g00200.t01	Wine grape	cytosol	76.54	75.82
CDY23269	Canola	cytosol	69.67	73.87
CDY13400	Canola	cytosol	69.43	72.35
Bra010263.1-P	Field mustard	cytosol	73.7	71.99
CDY36461	Canola	cytosol	69.91	71.95
PGSC0003DMT400029044	Potato	cytosol	72.27	71.93
Solyc12g010130.1.1	Tomato	cytosol	73.46	71.76
AT4G30960.1	Thale cress	cytosol	74.88	71.66
PGSC0003DMT400020443	Potato	cytosol	73.22	71.53
CDX72282	Canola	cytosol	68.72	71.43
CDY28231	Canola	cytosol	70.38	71.39
CDX68708	Canola	cytosol	70.38	71.39
Bra011236.1-P	Field mustard	cytosol	74.41	71.2
Bra024032.1-P	Field mustard	cytosol	73.46	70.94
GSMUA_AchrUn_...	Banana	cytosol	49.05	70.89
Solyc07g005440.1.1	Tomato	cytosol	71.09	70.75
GSMUA_Achr7P05210_001	Banana	cytosol	56.64	60.97
TraesCS4D01G113100.1	Wheat	cytosol	61.61	59.23
GSMUA_Achr7P26970_001	Banana	cytosol	54.03	59.22
TraesCS4B01G115400.1	Wheat	cytosol	61.37	59.0
TraesCS4A01G200000.1	Wheat	cytosol	61.37	59.0
TraesCS5D01G232500.1	Wheat	cytosol	54.27	58.72
HORVU5Hr1G065350.1	Barley	cytosol	61.61	58.3
TraesCS5A01G225200.1	Wheat	cytosol	61.37	58.07
Zm00001d032155_P001	Maize	cytosol	61.61	58.04
HORVU4Hr1G021090.1	Barley	cytosol	60.66	57.92
TraesCS5B01G223800.1	Wheat	cytosol	61.14	57.72
EES13913	Sorghum	cytosol	62.09	57.33
Zm00001d020497_P001	Maize	cytosol	57.82	55.08
EER96738	Sorghum	cytosol	56.64	54.57
KRH76102	Soybean	cytosol	59.24	53.53
KRH40770	Soybean	cytosol	58.06	53.26
KRH21249	Soybean	cytosol	56.87	53.22
KRH00415	Soybean	cytosol	58.06	53.03
Zm00001d050422_P001	Maize	cytosol	58.06	52.35
KRH44558	Soybean	cytosol	52.84	51.86
KRH61670	Soybean	mitochondrion	52.37	50.92
KRG97651	Soybean	cytosol	54.03	50.78
KRH52332	Soybean	cytosol	54.5	50.77
KRG94820	Soybean	cytosol	51.18	50.23
KRH65452	Soybean	cytosol	49.05	50.12
KRH72808	Soybean	cytosol	54.98	50.11
KRH47346	Soybean	cytosol	52.13	49.89
KRH31221	Soybean	cytosol	53.32	49.78
GSMUA_Achr10P...	Banana	cytosol	53.55	49.56
KRG98172	Soybean	cytosol	53.55	48.92
KRH17163	Soybean	cytosol	49.76	47.84
KRH30131	Soybean	cytosol	52.37	47.84
KRH72812	Soybean	cytosol	49.76	47.51
KRH09653	Soybean	cytosol	51.9	47.51
KRH21248	Soybean	cytosol	57.35	47.27
KRH11038	Soybean	cytosol	56.87	47.06
KRH58970	Soybean	cytosol	56.4	46.03
KRH42869	Soybean	cytosol	56.4	45.08
KRH23642	Soybean	cytosol, nucleus, plastid	44.79	44.47
KRG98160	Soybean	cytosol	47.39	44.44
KRH40763	Soybean	cytosol	45.97	44.29
KRH18584	Soybean	cytosol	47.39	43.86
KRH00424	Soybean	cytosol	45.73	43.57
Os09t0418500-00	Rice	extracellular	54.27	28.34

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100788568	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	UniProt:A0A0R0F950	EMBL:ACUP02010335
InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	EnsemblPlantsGene:GLYMA_17G074800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR018451	EnsemblPlants:KRH03068	ProteinID:KRH03068
ProteinID:KRH03068.1	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895
PANTHER:PTHR43895:SF8	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI000152A4E9	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:5871870..5874213

Molecular Weight (calculated)

47596.7 Da

IEP (calculated)

9.617

GRAVY (calculated)

-0.327

Length

422 amino acids

Sequence
(BLAST)

001: MNSERQSTTT TLLHGKYELG RVLGHGSFAK VYHARNLKTG QHVAMKVVGK EKVIKVGMME QVKREISVMK MVKHPNIVEL HEVMASKSKI YISIELVRGG
101: ELFNKVSKGR LKEDLARLYF QQLISAVDFC HSRGVYHRDL KPENLLLDEH GNLKVSDFGL TAFSDHLKED GLLHTTCGTP AYVSPEVIAK KGYDGAKADI
201: WSCGVILYVL LAGFLPFQDD NLVAMYKKIH RGDFKCPPWF SLDARKLVTK LLDPNPNTRI SISKVMESSW FKKQVPRKVE EVVEKVDLEE KIENQETMNA
301: FHIISLSEGF NLSPLFEEKR KEEMRFATAG TPSSVISRLE EVAKAGKFDV KSSETKVRLQ GQERGRKGKL AIAADIYAVT PSFMVVEVKK DNGDTLEYNQ
401: FCSKQLRPAL KDIFWNSAPA SA

Best Arabidopsis Sequence Match ( AT4G30960.1 )
(BLAST)

001: MVGAKPVENG SDGGSSTGLL HGRYELGRLL GHGTFAKVYH ARNIQTGKSV AMKVVGKEKV VKVGMVDQIK REISVMRMVK HPNIVELHEV MASKSKIYFA
101: MELVRGGELF AKVAKGRLRE DVARVYFQQL ISAVDFCHSR GVYHRDLKPE NLLLDEEGNL KVTDFGLSAF TEHLKQDGLL HTTCGTPAYV APEVILKKGY
201: DGAKADLWSC GVILFVLLAG YLPFQDDNLV NMYRKIYRGD FKCPGWLSSD ARRLVTKLLD PNPNTRITIE KVMDSPWFKK QATRSRNEPV AATITTTEED
301: VDFLVHKSKE ETETLNAFHI IALSEGFDLS PLFEEKKKEE KREMRFATSR PASSVISSLE EAARVGNKFD VRKSESRVRI EGKQNGRKGK LAVEAEIFAV
401: APSFVVVEVK KDHGDTLEYN NFCSTALRPA LKDIFWTSTP A

Arabidopsis Description

CIPK6CBL-interacting serine/threonine-protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65554]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.