Factsheet for GSMUA_Achr10P24060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr4P26350_001
GSMUA_Achr4P30070_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P12840_001
GSMUA_Achr9P17280_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G30960.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT4G30960.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592
AT4G30960.1	GSMUA_Achr4P26350_001	AT5G47100.1	17898163
AT4G30960.1	GSMUA_Achr4P30070_001	AT5G47100.1	17898163
AT4G30960.1	GSMUA_AchrUn_...	AT5G47100.1	17898163
AT4G30960.1	GSMUA_Achr9P12840_001	AT5G55990.1	11230129
AT4G30960.1	GSMUA_Achr9P12840_001	AT5G55990.1	17898163
AT4G30960.1	GSMUA_Achr9P12840_001	AT5G55990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	37.06	57.88
TraesCS4D01G113100.1	Wheat	cytosol	54.61	56.72
TraesCS4B01G115400.1	Wheat	cytosol	54.61	56.72
CDY23269	Canola	cytosol	49.34	56.53
TraesCS4A01G200000.1	Wheat	cytosol	54.17	56.26
CDY13400	Canola	cytosol	49.78	56.05
GSMUA_Achr7P05210_001	Banana	cytosol	48.03	55.87
HORVU4Hr1G021090.1	Barley	cytosol	53.95	55.66
VIT_11s0016g00200.t01	Wine grape	cytosol	51.75	55.4
CDX72282	Canola	cytosol	49.12	55.17
TraesCS5A01G225200.1	Wheat	cytosol	53.95	55.16
GSMUA_Achr7P26970_001	Banana	cytosol	46.49	55.06
TraesCS5B01G223800.1	Wheat	cytosol	53.95	55.03
HORVU5Hr1G065350.1	Barley	cytosol	53.73	54.93
CDY36461	Canola	cytosol	49.34	54.88
CDX68708	Canola	cytosol	50.0	54.81
CDY28231	Canola	cytosol	49.78	54.57
Bra010263.1-P	Field mustard	cytosol	51.32	54.17
KRH72285	Soybean	cytosol	50.88	53.95
EER96738	Sorghum	cytosol	51.75	53.88
Zm00001d020497_P001	Maize	cytosol	52.19	53.72
Zm00001d032155_P001	Maize	cytosol	52.63	53.57
KRH03068	Soybean	cytosol	49.56	53.55
Bra024032.1-P	Field mustard	cytosol	51.32	53.55
AT4G30960.1	Thale cress	cytosol	51.75	53.51
KRH12907	Soybean	cytosol	51.32	53.42
TraesCS5D01G232500.1	Wheat	cytosol	45.61	53.33
EES13913	Sorghum	cytosol	52.85	52.74
KRH37909	Soybean	cytosol	50.88	52.73
Bra011236.1-P	Field mustard	cytosol	50.88	52.61
PGSC0003DMT400029044	Potato	cytosol	48.68	52.36
GSMUA_Achr7P13860_001	Banana	mitochondrion	42.11	51.47
Solyc07g005440.1.1	Tomato	cytosol	47.59	51.18
PGSC0003DMT400020443	Potato	cytosol	48.03	50.69
Solyc12g010130.1.1	Tomato	cytosol	47.59	50.23
GSMUA_Achr6P26810_001	Banana	cytosol	38.82	50.14
Zm00001d050422_P001	Maize	cytosol	51.32	50.0
GSMUA_Achr8P21320_001	Banana	cytosol	40.35	49.86
GSMUA_Achr8P27320_001	Banana	cytosol, plastid	40.79	49.21
GSMUA_Achr7P22140_001	Banana	cytosol	39.47	48.78
GSMUA_Achr10P...	Banana	cytosol	38.38	48.61
GSMUA_Achr10P...	Banana	cytosol	42.32	47.65
GSMUA_Achr2P18880_001	Banana	cytosol	37.5	46.47
GSMUA_Achr7P16100_001	Banana	cytosol	40.35	46.46
GSMUA_Achr9P13300_001	Banana	cytosol	40.13	46.45
GSMUA_Achr8P01770_001	Banana	cytosol	34.65	46.06
GSMUA_Achr9P04780_001	Banana	cytosol	34.65	44.38
GSMUA_Achr6P14530_001	Banana	cytosol, mitochondrion	38.82	44.14
GSMUA_Achr6P32570_001	Banana	cytosol	33.11	41.14
GSMUA_Achr6P08690_001	Banana	cytosol	36.18	40.05
GSMUA_Achr7P25230_001	Banana	cytosol	30.92	39.5
GSMUA_Achr6P15810_001	Banana	cytosol	42.32	35.87
Os09t0418500-00	Rice	extracellular	54.82	30.94
GSMUA_Achr5P04480_001	Banana	cytosol, nucleus, plasma membrane	37.5	26.55

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G24060_001
EnsemblPlants:GSMUA_Achr10P24060_001	EnsemblPlants:GSMUA_Achr10T24060_001	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	UniProt:M0RKY1
InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF8	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296F6BD	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G24060_001]

Coordinates

chr10:-:28531010..28532742

Molecular Weight (calculated)

50618.1 Da

IEP (calculated)

10.310

GRAVY (calculated)

-0.317

Length

456 amino acids

Sequence
(BLAST)

001: MEELELPPES EGKGVLRGRY ELGRVLGHGT FAKVYAARDL RTGASVAMKV VAKEKVLRAG MAEQVMATRS RIFFAMELVR GGELFARIAR TGRLREDAAR
101: RYFRQLVYAV DFCHGRGVYH RDLKPENLLL DDAGDLKVAD FGLSALSDHA RADGLLHTAC GTPAYVAPEV IGKRGYDGAK ADLWSCGVIL FVLLAGYLPF
201: QDDNLVTMYR KIHRGDFRCP PWFSSDARRL VTKLLDPNPS TRITVAKLVE MTWFKKTPIP RPTSATEEAG EKGKKQEATA DEPETLNAFH LISLSQGFDL
301: SPLFEKDGRG RRDDGMRFAT RETAEGVVAR LEGVAARAGG KRPAVIPSNT RASAATNSAR RSKTSSGRPP PPPLIPDPRP LDRSQLRAKM EKTEVSLWSL
401: PSPSLDDPHV HHLVCRIYRT HRVVSHIPWR ITIAFLLSKS SFFPLPCSVN ILGLRR

Best Arabidopsis Sequence Match ( AT1G30270.1 )
(BLAST)

001: MASRTTPSRS TPSRSTPSGS SSGGRTRVGK YELGRTLGEG TFAKVKFARN VENGDNVAIK VIDKEKVLKN KMIAQIKREI STMKLIKHPN VIRMFEVMAS
101: KTKIYFVLEF VTGGELFDKI SSNGRLKEDE ARKYFQQLIN AVDYCHSRGV YHRDLKPENL LLDANGALKV SDFGLSALPQ QVREDGLLHT TCGTPNYVAP
201: EVINNKGYDG AKADLWSCGV ILFVLMAGYL PFEDSNLTSL YKKIFKAEFT CPPWFSASAK KLIKRILDPN PATRITFAEV IENEWFKKGY KAPKFENADV
301: SLDDVDAIFD DSGESKNLVV ERREEGLKTP VTMNAFELIS TSQGLNLGSL FEKQMGLVKR KTRFTSKSSA NEIVTKIEAA AAPMGFDVKT NNYKMKLTGE
401: KSGRKGQLAV ATEVFQVAPS LYMVEMRKSG GDTLEFHKFY KNLTTGLKDI VWKTIDEEKE EGTDGGGTNG AMANRTIAKQ ST

Arabidopsis Description

CIPK23CBL-interacting serine/threonine-protein kinase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q93VD3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.