Factsheet for Bra011236.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra017504.1-P
Bra018296.1-P
Bra022104.1-P
Bra028949.1-P
Bra033467.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G30960.1	Bra000214.1-P	AT2G41090.1	17360592
AT4G30960.1	Bra018296.1-P	AT3G51920.1	17360592
AT4G30960.1	Bra033467.1-P	AT3G51920.1	17360592
AT4G30960.1	Bra002368.1-P	AT5G21274.1	17360592
AT4G30960.1	Bra006595.1-P	AT5G21274.1	17360592
AT4G30960.1	Bra017504.1-P	AT5G47100.1	17898163
AT4G30960.1	Bra022104.1-P	AT5G47100.1	17898163
AT4G30960.1	Bra028949.1-P	AT5G55990.1	11230129
AT4G30960.1	Bra028949.1-P	AT5G55990.1	17898163
AT4G30960.1	Bra028949.1-P	AT5G55990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28231	Canola	cytosol	93.65	99.28
CDX68708	Canola	cytosol	92.74	98.32
AT4G30960.1	Thale cress	cytosol	95.01	95.01
Bra010263.1-P	Field mustard	cytosol	90.48	92.36
Bra024032.1-P	Field mustard	cytosol	90.7	91.53
VIT_11s0016g00200.t01	Wine grape	cytosol	75.06	77.7
PGSC0003DMT400029044	Potato	cytosol	72.11	75.0
KRH72285	Soybean	cytosol	72.79	74.65
KRH03068	Soybean	cytosol	71.2	74.41
Solyc07g005440.1.1	Tomato	cytosol	70.52	73.35
KRH12907	Soybean	cytosol	72.56	73.06
KRH37909	Soybean	cytosol	71.43	71.59
GSMUA_AchrUn_...	Banana	cytosol	47.39	71.58
PGSC0003DMT400020443	Potato	cytosol	70.07	71.53
Solyc12g010130.1.1	Tomato	cytosol	69.84	71.3
GSMUA_Achr7P05210_001	Banana	cytosol	56.01	63.01
TraesCS5D01G232500.1	Wheat	cytosol	54.2	61.28
TraesCS4B01G115400.1	Wheat	cytosol	60.09	60.36
TraesCS5A01G225200.1	Wheat	cytosol	61.0	60.31
GSMUA_Achr7P26970_001	Banana	cytosol	52.61	60.26
TraesCS4A01G200000.1	Wheat	cytosol	59.86	60.14
TraesCS4D01G113100.1	Wheat	cytosol	59.86	60.14
HORVU5Hr1G065350.1	Barley	cytosol	60.77	60.09
TraesCS5B01G223800.1	Wheat	cytosol	60.77	59.96
HORVU4Hr1G021090.1	Barley	cytosol	58.96	58.82
Bra021992.1-P	Field mustard	cytosol	57.6	58.39
Zm00001d032155_P001	Maize	cytosol	59.18	58.26
Zm00001d020497_P001	Maize	cytosol	58.05	57.79
EES13913	Sorghum	cytosol	59.41	57.33
EER96738	Sorghum	cytosol	56.46	56.85
Bra020371.1-P	Field mustard	cytosol	55.33	55.08
Zm00001d050422_P001	Maize	cytosol	57.14	53.85
Bra002654.1-P	Field mustard	cytosol	56.24	53.68
Bra009003.1-P	Field mustard	cytosol	51.93	52.77
Bra009294.1-P	Field mustard	cytosol	52.38	52.5
Bra009293.1-P	Field mustard	cytosol	54.65	51.83
Bra028709.1-P	Field mustard	cytosol	51.25	51.48
Bra021628.1-P	Field mustard	cytosol	44.67	51.44
GSMUA_Achr10P...	Banana	cytosol	52.61	50.88
Bra020996.1-P	Field mustard	cytosol	55.56	50.2
Bra027311.1-P	Field mustard	cytosol	41.27	49.59
Bra025052.1-P	Field mustard	cytosol	53.97	49.48
Bra025051.1-P	Field mustard	cytosol	39.46	49.43
Bra022794.1-P	Field mustard	cytosol	47.62	49.18
Bra013340.1-P	Field mustard	cytosol	54.65	48.79
Bra005447.1-P	Field mustard	cytosol, mitochondrion, plastid	53.97	48.37
Bra018319.1-P	Field mustard	cytosol	48.3	48.19
Bra032042.1-P	Field mustard	cytosol	50.11	47.94
Bra028912.1-P	Field mustard	cytosol	39.91	47.7
Bra005446.1-P	Field mustard	mitochondrion	52.15	47.33
Bra010841.1-P	Field mustard	cytosol, plastid	55.56	46.76
Bra021897.1-P	Field mustard	plastid	52.83	45.51
Bra005103.1-P	Field mustard	cytosol	42.18	43.56
Bra000066.1-P	Field mustard	cytosol	41.95	43.02
Os09t0418500-00	Rice	extracellular	53.06	28.96

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	EnsemblPlantsGene:Bra011236	EnsemblPlants:Bra011236.1	EnsemblPlants:Bra011236.1-P
InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	UniProt:M4D432	InterPro:NAF/FISL_domain
InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF8	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002546BB6	SEG:seg	:

Description

AT4G30960 (E=4e-224) CIPK6, SIP3, SNRK3.14, ATCIPK6 | SIP3 (SOS3-INTERACTING PROTEIN 3); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA01:-:3156144..3157633

Molecular Weight (calculated)

49172.3 Da

IEP (calculated)

8.837

GRAVY (calculated)

-0.283

Length

441 amino acids

Sequence
(BLAST)

001: MVGAKPIENE SDGGASTGLL HGRYELGRLL GHGTFAKVYH ARNVTTGKSV AMKVVGKEKV VKVGMVDQIK REISVMRMVK HPNIVELHEV MASKTKIYFA
101: MELVRGGELF AKVAKGRLRE DVARVYFQQL ISAVDFCHSR GVYHRDLKPE NLLLDEEGNL KVTDFGLSAF TEHLKQDGLL HTTCGTPAYV APEVILKKGY
201: DGAKADLWSC GVILFVLLAG YLPFQDDNLV NMYRKIYRGD FKCPGWLSSD ARRLVAKLLD PNPNTRITID KVMDSHWFKK SSTRSRNEPV AATPEAEEDV
301: DVSVHKSKEE TETLNAFHII ALSEGFDLSP LFEEKKKEEK VEMRFATSRP ASSVISSLEE AAKVGNKFDV RKSESRVRME GKLSGRKGKL AVEAEIFAVA
401: PSFVVVEVKK DHGDTLEYNN FCSTALRPAL KDIFWTSTTP A

Best Arabidopsis Sequence Match ( AT4G30960.1 )
(BLAST)

001: MVGAKPVENG SDGGSSTGLL HGRYELGRLL GHGTFAKVYH ARNIQTGKSV AMKVVGKEKV VKVGMVDQIK REISVMRMVK HPNIVELHEV MASKSKIYFA
101: MELVRGGELF AKVAKGRLRE DVARVYFQQL ISAVDFCHSR GVYHRDLKPE NLLLDEEGNL KVTDFGLSAF TEHLKQDGLL HTTCGTPAYV APEVILKKGY
201: DGAKADLWSC GVILFVLLAG YLPFQDDNLV NMYRKIYRGD FKCPGWLSSD ARRLVTKLLD PNPNTRITIE KVMDSPWFKK QATRSRNEPV AATITTTEED
301: VDFLVHKSKE ETETLNAFHI IALSEGFDLS PLFEEKKKEE KREMRFATSR PASSVISSLE EAARVGNKFD VRKSESRVRI EGKQNGRKGK LAVEAEIFAV
401: APSFVVVEVK KDHGDTLEYN NFCSTALRPA LKDIFWTSTP A

Arabidopsis Description

CIPK6CBL-interacting serine/threonine-protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65554]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.