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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER94470
EES01631
EES09201
EES16322
OQU78227
OQU79501

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G30960.1 EES01631 AT2G41090.1 17360592
AT4G30960.1 EES09201 AT2G41090.1 17360592
AT4G30960.1 EES16322 AT2G41090.1 17360592
AT4G30960.1 OQU78227 AT2G41090.1 17360592
AT4G30960.1 EES01631 AT5G21274.1 17360592
AT4G30960.1 EES09201 AT5G21274.1 17360592
AT4G30960.1 EES16322 AT5G21274.1 17360592
AT4G30960.1 OQU78227 AT5G21274.1 17360592
AT4G30960.1 EER94470 AT5G47100.1 17898163
AT4G30960.1 OQU79501 AT5G55990.1 11230129
AT4G30960.1 OQU79501 AT5G55990.1 17898163
AT4G30960.1 OQU79501 AT5G55990.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020497_P001 Maize cytosol 92.01 90.97
TraesCS5B01G223800.1 Wheat cytosol 78.08 76.51
TraesCS5A01G225200.1 Wheat cytosol 77.85 76.46
HORVU5Hr1G065350.1 Barley cytosol 77.17 75.78
TraesCS5D01G232500.1 Wheat cytosol 65.75 73.85
EES13913 Sorghum cytosol 72.15 69.15
VIT_11s0016g00200.t01 Wine grape cytosol 58.22 59.86
CDY23269 Canola cytosol 54.11 59.55
CDX72282 Canola cytosol 55.02 59.36
CDY13400 Canola cytosol 54.11 58.52
Bra010263.1-P Field mustard cytosol 57.08 57.87
CDY36461 Canola cytosol 53.88 57.56
CDX68708 Canola cytosol 54.57 57.45
CDY28231 Canola cytosol 54.57 57.45
KRH12907 Soybean cytosol 56.85 56.85
Bra024032.1-P Field mustard cytosol 56.62 56.75
KRH03068 Soybean cytosol 54.57 56.64
KRH72285 Soybean cytosol 55.48 56.51
Bra011236.1-P Field mustard cytosol 56.85 56.46
AT4G30960.1 Thale cress cytosol 56.85 56.46
KRH37909 Soybean cytosol 56.39 56.14
Solyc12g010130.1.1 Tomato cytosol 55.25 56.02
PGSC0003DMT400029044 Potato cytosol 54.11 55.9
PGSC0003DMT400020443 Potato cytosol 55.02 55.79
Solyc07g005440.1.1 Tomato cytosol 53.42 55.19
GSMUA_Achr10P... Banana cytosol 53.88 51.75
OQU77749 Sorghum cytosol 50.46 51.28
OQU77747 Sorghum cytosol 50.46 51.28
EES00092 Sorghum cytosol 51.14 49.23
KXG36943 Sorghum cytosol 49.32 48.11
EES09124 Sorghum cytosol 48.17 47.63
EES06320 Sorghum cytosol 49.09 46.64
EES19682 Sorghum cytosol 47.95 46.05
EES15653 Sorghum cytosol 46.35 45.62
EER94892 Sorghum cytosol 44.98 44.98
OQU87587 Sorghum cytosol 49.54 44.56
EER98907 Sorghum cytosol 47.72 43.63
OQU78296 Sorghum plastid 49.09 42.49
KXG33627 Sorghum cytosol 50.0 42.44
EES03646 Sorghum plastid 47.03 39.69
EES02274 Sorghum cytosol 45.21 38.52
Os09t0418500-00 Rice extracellular 69.63 37.75
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.310.80EntrezGene:8060255UniProt:C4P7S4InterPro:Ca/CaM-dep_Ca-dep_prot_KinaseEnsemblPlants:EER96738
ProteinID:EER96738ProteinID:EER96738.1EMBL:FJ901203GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0018105
GO:GO:0018107GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR018451InterPro:Kinase-like_dom_sf
InterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS50816PANTHER:PTHR43895PANTHER:PTHR43895:SF20InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3002G203100SUPFAM:SSF56112unigene:Sbi.13590unigene:Sbi.21640
InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A42017RefSeq:XP_002460217.1SEG:seg::
Description
hypothetical protein
Coordinates
chr2:+:59341897..59344310
Molecular Weight (calculated)
47426.1 Da
IEP (calculated)
8.567
GRAVY (calculated)
-0.118
Length
438 amino acids
Sequence
(BLAST)
001: MEDAVAADGK SVLQGRYELG RVLGHGNFGR VHAARDLRTG RGVAVKVVAK DKLERAGMAE QIKREIAAMK MVSHPNIVEL HEVMATRSKI YLALELVRGG
101: ELFSRIARAG RVREDVARRY FRQLVSAVHF CHGRGVYHRD LKLENLLLDE AGNLKVADFG LSALAGHARS DGLLHTACGT PSYVAPEVLG GKGYDGAKAD
201: LWSCGVILYV LLVGRLPFHE DNLMVMYRKM QRGEFLCPPW VSADARKLIG DLLDPNPSTR ITVARLVETP WYQKPLPVLP PLNVKEPAPG AGATPDARRA
301: SADDKEEPEV LNAFHLISLS EGFDLSPLFD HGRGVGRCSA GGVRFATREA ASSVVSRLES LVTTGRGANM RVTRSGSRGV RLAVAAEIFS VAPSAVLLVD
401: VNKDGGDTME YQSFCSEELR PALKDVVWAS GEDTPGAA
Best Arabidopsis Sequence Match ( AT1G30270.1 )
(BLAST)
001: MASRTTPSRS TPSRSTPSGS SSGGRTRVGK YELGRTLGEG TFAKVKFARN VENGDNVAIK VIDKEKVLKN KMIAQIKREI STMKLIKHPN VIRMFEVMAS
101: KTKIYFVLEF VTGGELFDKI SSNGRLKEDE ARKYFQQLIN AVDYCHSRGV YHRDLKPENL LLDANGALKV SDFGLSALPQ QVREDGLLHT TCGTPNYVAP
201: EVINNKGYDG AKADLWSCGV ILFVLMAGYL PFEDSNLTSL YKKIFKAEFT CPPWFSASAK KLIKRILDPN PATRITFAEV IENEWFKKGY KAPKFENADV
301: SLDDVDAIFD DSGESKNLVV ERREEGLKTP VTMNAFELIS TSQGLNLGSL FEKQMGLVKR KTRFTSKSSA NEIVTKIEAA AAPMGFDVKT NNYKMKLTGE
401: KSGRKGQLAV ATEVFQVAPS LYMVEMRKSG GDTLEFHKFY KNLTTGLKDI VWKTIDEEKE EGTDGGGTNG AMANRTIAKQ ST
Arabidopsis Description
CIPK23CBL-interacting serine/threonine-protein kinase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q93VD3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.