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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d008901_P001 Maize cytosol 90.11 90.51
Os01t0206700-01 Rice cytosol 85.93 84.82
TraesCS3B01G169300.1 Wheat cytosol, mitochondrion 84.84 83.19
TraesCS3D01G151500.1 Wheat cytosol, mitochondrion 84.4 82.76
TraesCS3A01G135500.1 Wheat cytosol, mitochondrion 83.96 81.97
HORVU3Hr1G029350.3 Barley cytosol 84.84 68.56
VIT_10s0003g01410.t01 Wine grape cytosol 67.25 65.52
Bra021992.1-P Field mustard cytosol 61.1 63.91
CDY26359 Canola cytosol 61.1 63.91
AT5G45820.1 Thale cress cytosol 61.1 63.33
PGSC0003DMT400073291 Potato cytosol 63.08 62.66
Solyc02g072540.2.1 Tomato cytosol 62.86 62.17
OQU77749 Sorghum cytosol 58.68 61.95
OQU77747 Sorghum cytosol 58.68 61.95
Solyc03g006110.2.1 Tomato cytosol 62.64 61.29
KXG36943 Sorghum cytosol 59.12 59.91
KRH21249 Soybean cytosol 59.34 59.87
EES09124 Sorghum cytosol 54.73 56.21
EER94892 Sorghum cytosol 53.85 55.94
Bra025051.1-P Field mustard cytosol 42.86 55.4
CDY67622 Canola cytosol 34.07 55.16
EES15653 Sorghum cytosol 53.85 55.06
CDX87763 Canola plasma membrane 47.47 54.82
EES06320 Sorghum cytosol 55.38 54.66
PGSC0003DMT400068762 Potato cytosol 44.18 54.32
EES13913 Sorghum cytosol 52.75 52.52
EES19682 Sorghum cytosol 52.09 51.97
EER96738 Sorghum cytosol 49.23 51.14
OQU78296 Sorghum plastid 54.95 49.41
OQU87587 Sorghum cytosol 52.31 48.87
KXG33627 Sorghum cytosol 54.29 47.87
EES03646 Sorghum plastid 53.63 47.01
EER98907 Sorghum cytosol 47.47 45.09
EES02274 Sorghum cytosol 49.23 43.58
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.200.20Gene3D:3.30.310.80EntrezGene:8080496UniProt:C4P7S9InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase
EnsemblPlants:EES00092ProteinID:EES00092ProteinID:EES00092.1EMBL:FJ901208GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0018105GO:GO:0018107
GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR018451InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domain
InterPro:NAF_domPFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PFscan:PS50816PANTHER:PTHR43895PANTHER:PTHR43895:SF3InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220EnsemblPlantsGene:SORBI_3003G024400SUPFAM:SSF56112unigene:Sbi.21636unigene:Sbi.943InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelixUniParc:UPI0001A42021RefSeq:XP_002454972.1:::
Description
hypothetical protein
Coordinates
chr3:+:2083925..2085861
Molecular Weight (calculated)
50833.3 Da
IEP (calculated)
9.666
GRAVY (calculated)
-0.338
Length
455 amino acids
Sequence
(BLAST)
001: MEKKPTILMN RYELGRMLGQ GTFAKVYHGR NLASSQSVAI KVIDKEKVLR VGMIDQIKRE ISVMRLVRHP NVVQLHEVMA SKSKIYFAME YVRGGELFAR
101: VARGRLKEDV ARRYFHQLIG AVDFCHSRGV YHRDLKPENL LVDEHGNLKV SDFGLSALKE CQKQDGLLHT TCGTPAYVAP EIISKKGYDG AKADIWSCGV
201: ILFVLLAGYL PFHDSNLMEM YRRISRGDVK YPQWFSSDLR RFMSKLLDPN PNTRITIEKL VEHPWFKKGY KPAVMLAQPH GSNSLKDVQV AFSTADNEGG
301: SKVEQPAGSS VKPSSLNAFD IISHSKGFDL SGLFAVDQEQ KASNSRFMTQ KPASAIVSKL EQIAETESFM VKKQDGLVKL QGSKEGRKGQ LAIDAEIFEV
401: TPAFYVVEVK KSAGDTLEYE RFCNKGLRPS LSDICWSSQS EAPSGVQSSP LKPSS
Best Arabidopsis Sequence Match ( AT5G45820.1 )
(BLAST)
001: MDKNGIVLMR KYELGRLLGQ GTFAKVYHAR NIKTGESVAI KVIDKQKVAK VGLIDQIKRE ISVMRLVRHP HVVFLHEVMA SKTKIYFAME YVKGGELFDK
101: VSKGKLKENI ARKYFQQLIG AIDYCHSRGV YHRDLKPENL LLDENGDLKI SDFGLSALRE SKQQDGLLHT TCGTPAYVAP EVIGKKGYDG AKADVWSCGV
201: VLYVLLAGFL PFHEQNLVEM YRKITKGEFK CPNWFPPEVK KLLSRILDPN PNSRIKIEKI MENSWFQKGF KKIETPKSPE SHQIDSLISD VHAAFSVKPM
301: SYNAFDLISS LSQGFDLSGL FEKEERSESK FTTKKDAKEI VSKFEEIATS SERFNLTKSD VGVKMEDKRE GRKGHLAIDV EIFEVTNSFH MVEFKKSGGD
401: TMEYKQFCDR ELRPSLKDIV WKWQGNNNNS NNEKIEVIH
Arabidopsis Description
CIPK20CBL-interacting serine/threonine-protein kinase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ54]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.