Skip to main content
crop-pal logo
Sorghum
Search for another protein from :
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 4
  • plastid 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:cytosol
ChloroP:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER94470
OQU79501
OQU83613

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G29230.1 EER94470 AT5G47100.1 14730064
AT1G29230.1 EER94470 AT5G47100.1 14730130
AT1G29230.1 OQU79501 AT5G55990.1 14730130
AT2G34180.1 OQU79501 AT5G55990.1 11230129
AT2G34180.1 OQU79501 AT5G55990.1 14730130
AT4G18700.1 OQU83613 AT5G38480.1 21798944
AT4G18700.1 EER94470 AT5G47100.1 14730064
AT4G18700.1 OQU79501 AT5G55990.1 11230129
AT4G18700.1 OQU79501 AT5G55990.1 14730130
AT4G18700.1 OQU79501 AT5G55990.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043389_P003 Maize cytosol, plastid 94.41 89.42
Zm00001d012696_P001 Maize plastid 87.86 88.2
TraesCS3A01G305900.1 Wheat plastid 79.19 78.74
OQU78296 Sorghum plastid 75.34 77.27
TraesCS3B01G330600.1 Wheat plastid 77.84 76.95
TraesCS3D01G296000.1 Wheat plastid 49.9 73.37
Os01t0759400-02 Rice cytosol, plastid 74.37 71.48
HORVU3Hr1G073100.2 Barley cytosol 79.19 71.35
VIT_10s0003g01420.t01 Wine grape cytosol 61.27 67.66
CDY69878 Canola cytosol 55.49 66.82
CDX78885 Canola cytosol 59.34 65.95
CDX99438 Canola cytosol 58.57 64.96
CDY17228 Canola cytosol, mitochondrion, plastid 57.61 63.89
Solyc02g072530.1.1 Tomato cytosol 58.77 63.81
CDY67623 Canola cytosol 55.68 63.8
AT4G18700.1 Thale cress cytosol 59.92 63.6
Bra013340.1-P Field mustard cytosol 60.31 63.36
PGSC0003DMT400073132 Potato cytosol 58.19 63.18
KRH11038 Soybean cytosol 62.04 63.14
Bra020996.1-P Field mustard cytosol 59.34 63.11
KRH21248 Soybean cytosol 62.24 63.09
Bra005446.1-P Field mustard mitochondrion 58.38 62.35
CDY68616 Canola cytosol, mitochondrion 55.88 62.23
CDY70469 Canola cytosol 57.23 61.88
CDY68813 Canola mitochondrion 55.49 61.8
Bra025052.1-P Field mustard cytosol 57.03 61.54
AT5G45810.1 Thale cress cytosol 57.03 61.28
CDY67391 Canola cytosol 56.45 61.17
CDY43329 Canola cytosol 60.69 61.16
CDY63139 Canola cytosol 55.88 60.92
Bra005447.1-P Field mustard cytosol, mitochondrion, plastid 57.61 60.77
AT1G29230.1 Thale cress cytosol, plastid 60.89 60.77
KRH58970 Soybean cytosol 60.31 60.54
CDX90179 Canola cytosol, plastid 61.08 60.5
Bra010841.1-P Field mustard cytosol, plastid 61.08 60.5
KRH42869 Soybean cytosol 60.31 59.28
AT2G34180.1 Thale cress plastid 57.03 58.96
CDY37668 Canola vacuole 56.84 58.88
Bra021897.1-P Field mustard plastid 57.23 58.01
OQU77747 Sorghum cytosol 45.86 55.22
OQU77749 Sorghum cytosol 45.66 54.99
EES02274 Sorghum cytosol 53.56 54.09
KXG36943 Sorghum cytosol 46.63 53.9
EES00092 Sorghum cytosol 47.01 53.63
CDY34052 Canola cytosol 50.48 51.78
EER94892 Sorghum cytosol 42.39 50.23
EES19682 Sorghum cytosol 43.55 49.56
EES06320 Sorghum cytosol 43.55 49.02
EES09124 Sorghum cytosol 41.81 48.98
EES15653 Sorghum cytosol 41.62 48.54
OQU87587 Sorghum cytosol 44.7 47.64
EES13913 Sorghum cytosol 41.81 47.48
EER96738 Sorghum cytosol 39.69 47.03
EER98907 Sorghum cytosol 40.85 44.26
KXG33627 Sorghum cytosol 42.77 43.02
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.310.80EntrezGene:8079226UniProt:C4P7T3InterPro:Ca/CaM-dep_Ca-dep_prot_KinaseEnsemblPlants:EES03646
ProteinID:EES03646ProteinID:EES03646.1EMBL:FJ901212GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0018105
GO:GO:0018107GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR018451InterPro:Kinase-like_dom_sf
InterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069PFAM:PF03822ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PFscan:PS50816PANTHER:PTHR43895PANTHER:PTHR43895:SF6InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220EnsemblPlantsGene:SORBI_3003G302800SUPFAM:SSF56112unigene:Sbi.21632unigene:Sbi.5399InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001A42025RefSeq:XP_002458526.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:-:63336649..63341543
Molecular Weight (calculated)
56992.9 Da
IEP (calculated)
9.091
GRAVY (calculated)
-0.260
Length
519 amino acids
Sequence
(BLAST)
001: MAAVTPPPQS DPSPKAGRPA SSAAAAAAAK RGGGGAGAAG GLLMGKYELG RLLGHGTFAK VYLARHVGTG DSVAIKVLDK EKAVKSGLVP HIKREIAVLR
101: RVRHPNVVHL FEVMATKTKI YFVMELVRGG ELFSRVSKGR LREDNARRYF QQLVSAVGFC HARGVFHRDL KPENLLVDDR GNLKVSDFGL SAVADQFRPD
201: GLLHTFCGTP AYVAPEVLGR RGYDGAKADV WSCGVILFVL MAGYLPFHDK NIMAMYKKIY KGEFRCARWF SKDLTSLLTR ILDTNPNTRI TLPEIMESRW
301: FKKGFKPVKF YIEDDQLHNV IDDEDGLLDM GPAGTVPPPL PPPPPPLPPP KVDGDESGSD SDSSISSCPA SVLSGESQRP RGSLPRPASL NAFDIISFSR
401: GFNLSGLFEE KGDEVRFISA EPMSDIITKL EDIAKLKSFK LRRKDWRICL EGTREGVKGP LTIGAEVFEL TPPLVMVEVK KKAGDNEEYE DFCNKELKPG
501: MQHLVHHMVR APSMLTDAE
Best Arabidopsis Sequence Match ( AT4G18700.1 )
(BLAST)
001: MAEKITRETS LPKERSSPQA LILGRYEMGK LLGHGTFAKV YLARNVKTNE SVAIKVIDKE KVLKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE
Arabidopsis Description
CIPK12CBL-interacting serine/threonine-protein kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN43]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.