Factsheet for Bra010841.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra017504.1-P
Bra022104.1-P
Bra028949.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G29230.1	Bra017504.1-P	AT5G47100.1	14730064
AT1G29230.1	Bra022104.1-P	AT5G47100.1	14730064
AT1G29230.1	Bra017504.1-P	AT5G47100.1	14730130
AT1G29230.1	Bra022104.1-P	AT5G47100.1	14730130
AT1G29230.1	Bra028949.1-P	AT5G55990.1	14730130

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90179	Canola	cytosol, plastid	98.86	98.86
CDY43329	Canola	cytosol	96.37	98.06
AT1G29230.1	Thale cress	cytosol, plastid	88.93	89.62
Bra005446.1-P	Field mustard	mitochondrion	68.7	74.07
Bra005447.1-P	Field mustard	cytosol, mitochondrion, plastid	69.47	73.98
Bra021897.1-P	Field mustard	plastid	70.61	72.27
Bra013340.1-P	Field mustard	cytosol	64.89	68.83
Bra020996.1-P	Field mustard	cytosol	63.93	68.65
Bra025052.1-P	Field mustard	cytosol	61.45	66.94
HORVU6Hr1G054210.3	Barley	cytosol	53.44	63.93
EES03646	Sorghum	plastid	60.5	61.08
Zm00001d038690_P001	Maize	cytosol	57.82	60.24
OQU78296	Sorghum	plastid	57.63	59.68
Os05t0514200-01	Rice	cytosol, plastid	57.63	59.45
Zm00001d010743_P001	Maize	cytosol, plastid	57.44	59.14
TraesCS3A01G305900.1	Wheat	plastid	58.59	58.81
TraesCS3B01G330600.1	Wheat	plastid	58.78	58.67
HORVU1Hr1G076910.3	Barley	cytosol, plastid	56.68	58.24
Zm00001d012696_P001	Maize	plastid	57.25	58.03
TraesCS1B01G347100.1	Wheat	plastid	56.68	57.23
Zm00001d043389_P003	Maize	cytosol, plastid	59.73	57.12
TraesCS1A01G333800.1	Wheat	plastid	56.68	57.01
Bra024032.1-P	Field mustard	cytosol	46.76	56.06
Bra027311.1-P	Field mustard	cytosol	38.93	55.59
Bra011236.1-P	Field mustard	cytosol	46.76	55.56
Bra010263.1-P	Field mustard	cytosol	45.8	55.56
Os01t0759400-02	Rice	cytosol, plastid	56.49	54.81
TraesCS3D01G296000.1	Wheat	plastid	36.64	54.39
Bra022794.1-P	Field mustard	cytosol	44.27	54.33
Bra018319.1-P	Field mustard	cytosol	45.61	54.07
Bra021992.1-P	Field mustard	cytosol	44.85	54.02
HORVU3Hr1G073100.2	Barley	cytosol	58.78	53.47
Bra021628.1-P	Field mustard	cytosol	38.74	53.0
Bra028912.1-P	Field mustard	cytosol	37.21	52.85
HORVU3Hr1G025810.1	Barley	cytosol	51.34	52.64
TraesCS3B01G153800.1	Wheat	mitochondrion	51.91	52.41
EES02274	Sorghum	cytosol	51.34	52.33
TraesCS3D01G136700.1	Wheat	mitochondrion	51.72	52.12
Os01t0206300-00	Rice	cytosol	50.57	51.86
TraesCS3A01G135700.1	Wheat	mitochondrion	51.15	51.34
Bra020371.1-P	Field mustard	cytosol	43.32	51.24
Zm00001d008899_P001	Maize	cytosol	50.19	51.07
Bra028709.1-P	Field mustard	cytosol	42.56	50.8
Bra009294.1-P	Field mustard	cytosol	42.18	50.23
Bra002654.1-P	Field mustard	cytosol	44.27	50.22
Bra009003.1-P	Field mustard	cytosol	40.84	49.31
Bra009293.1-P	Field mustard	cytosol	43.7	49.25
Bra005103.1-P	Field mustard	cytosol	38.74	47.54
Bra000066.1-P	Field mustard	cytosol	38.93	47.44
Bra025051.1-P	Field mustard	cytosol	31.3	46.59
Bra032042.1-P	Field mustard	cytosol	40.27	45.77

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.310.80	EnsemblPlantsGene:Bra010841	EnsemblPlants:Bra010841.1	EnsemblPlants:Bra010841.1-P	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	UniProt:M4D2Y8	InterPro:NAF/FISL_domain	InterPro:NAF_dom
PFAM:PF00069	PFAM:PF03822	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816
PANTHER:PTHR43895	PANTHER:PTHR43895:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00025454B2	SEG:seg	:	:	:

Description

AT1G29230 (E=1e-226) CIPK18, SnRK3.20, ATWL1, WL1 | CIPK18 (CBL-INTERACTING PROTEIN KINASE 18); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA08:+:16747648..16749222

Molecular Weight (calculated)

58875.3 Da

IEP (calculated)

7.691

GRAVY (calculated)

-0.287

Length

524 amino acids

Sequence
(BLAST)

001: MSQALAPPPL LVVTTVVPDP PHPPPPPQQK PYALQYVTEL LSRIGIKDTD KDGNISPQSP RSPRNNILMG KYELGKLLGH GTFAKVYLAL NIKSGENVAI
101: KVIDKEKIMK SGLVAHIKRE ISILRRVRHP YVVHLFEVMA TKTKIYFVME YVPGGELFNK VAKGRLPEDT ARRYFQQLIS SVSFCHGRGV YHRDLKPENL
201: LLDAKGNLKV SDFGLSAVAE QLRIDGLCHT FCGTPAYLAP EVLTRKGYDA AKADVWSCGV ILFVLMAGHI PFYDKNIMAM YKKIYKGEFR CPRWFSSDLI
301: RLLTRLLDTN PDTRITIPEI MKSRWFKKGF KHVKFYIEDD KLCRDDEEEE EESCSSGRSS TVSESDAEFD VKRIGSMPRP ASLNAFDIIS FSSGFDLSGL
401: FEEGGEGTRF LSGAPVSEII AKLEEIARVV SFTVRKKEWS LRLEGCREGA KGPLTIGAEI FELTPSLVVV EVKQKGGDRD EYEEFCNKKL RPELDKLMHD
501: RGEDKGKGDV VVEEEAMCLP CDTV

Best Arabidopsis Sequence Match ( AT1G29230.1 )
(BLAST)

001: MAQALAQPPL VVTTVVPDPP PPPPPPHPKP YALRYMADLL GRIGIMDTDK DGNISPQSPR SPRSPRNNIL MGKYELGKLL GHGTFAKVYL AQNIKSGDKV
101: AIKVIDKEKI MKSGLVAHIK REISILRRVR HPYIVHLFEV MATKSKIYFV MEYVGGGELF NTVAKGRLPE ETARRYFQQL ISSVSFCHGR GVYHRDLKPE
201: NLLLDNKGNL KVSDFGLSAV AEQLRQDGLC HTFCGTPAYI APEVLTRKGY DAAKADVWSC GVILFVLMAG HIPFYDKNIM VMYKKIYKGE FRCPRWFSSD
301: LVRLLTRLLD TNPDTRITIP EIMKNRWFKK GFKHVKFYIE DDKLCREDED EEEEASSSGR SSTVSESDAE FDVKRMGIGS MPRPSSLNAF DIISFSSGFD
401: LSGLFEEEGG EGTRFVSGAP VSKIISKLEE IAKIVSFTVR KKEWSLRLEG CREGAKGPLT IAAEIFELTP SLVVVEVKKK GGDREEYEEF CNKELRPELE
501: KLIHEEVVVE EALYLPSDTE

Arabidopsis Description

CIPK18Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WD98]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.