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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra017504.1-P
Bra018296.1-P
Bra022104.1-P
Bra028949.1-P
Bra033467.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G30960.1 Bra000214.1-P AT2G41090.1 17360592
AT4G30960.1 Bra018296.1-P AT3G51920.1 17360592
AT4G30960.1 Bra033467.1-P AT3G51920.1 17360592
AT4G30960.1 Bra002368.1-P AT5G21274.1 17360592
AT4G30960.1 Bra006595.1-P AT5G21274.1 17360592
AT4G30960.1 Bra017504.1-P AT5G47100.1 17898163
AT4G30960.1 Bra022104.1-P AT5G47100.1 17898163
AT4G30960.1 Bra028949.1-P AT5G55990.1 11230129
AT4G30960.1 Bra028949.1-P AT5G55990.1 17898163
AT4G30960.1 Bra028949.1-P AT5G55990.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23269 Canola cytosol 91.44 99.25
AT4G30960.1 Thale cress cytosol 93.06 91.16
Bra011236.1-P Field mustard cytosol 92.36 90.48
Bra024032.1-P Field mustard cytosol 91.2 90.16
VIT_11s0016g00200.t01 Wine grape cytosol 76.85 77.93
KRH72285 Soybean cytosol 74.07 74.42
KRH03068 Soybean cytosol 71.99 73.7
PGSC0003DMT400029044 Potato cytosol 71.76 73.11
KRH12907 Soybean cytosol 73.15 72.15
Solyc07g005440.1.1 Tomato cytosol 70.14 71.46
GSMUA_AchrUn_... Banana cytosol 48.15 71.23
KRH37909 Soybean cytosol 72.45 71.14
PGSC0003DMT400020443 Potato cytosol 70.14 70.14
Solyc12g010130.1.1 Tomato cytosol 69.91 69.91
TraesCS5D01G232500.1 Wheat cytosol 55.56 61.54
GSMUA_Achr7P05210_001 Banana cytosol 55.56 61.22
TraesCS4B01G115400.1 Wheat cytosol 61.57 60.59
TraesCS4A01G200000.1 Wheat cytosol 61.34 60.36
TraesCS4D01G113100.1 Wheat cytosol 61.34 60.36
TraesCS5A01G225200.1 Wheat cytosol 62.27 60.31
HORVU5Hr1G065350.1 Barley cytosol 62.04 60.09
TraesCS5B01G223800.1 Wheat cytosol 62.04 59.96
GSMUA_Achr7P26970_001 Banana cytosol 53.24 59.74
HORVU4Hr1G021090.1 Barley cytosol 60.65 59.28
Zm00001d032155_P001 Maize cytosol 60.65 58.48
Zm00001d020497_P001 Maize cytosol 59.49 58.01
Bra021992.1-P Field mustard cytosol 57.87 57.47
EES13913 Sorghum cytosol 60.42 57.11
EER96738 Sorghum cytosol 57.87 57.08
Bra020371.1-P Field mustard cytosol 55.79 54.4
Zm00001d050422_P001 Maize cytosol 58.1 53.63
Bra002654.1-P Field mustard cytosol 56.25 52.6
Bra009003.1-P Field mustard cytosol 52.55 52.3
Bra009294.1-P Field mustard cytosol 52.78 51.82
GSMUA_Achr10P... Banana cytosol 54.17 51.32
Bra028709.1-P Field mustard cytosol 52.08 51.25
Bra009293.1-P Field mustard cytosol 54.86 50.97
Bra021628.1-P Field mustard cytosol 44.91 50.65
Bra025051.1-P Field mustard cytosol 40.05 49.15
Bra020996.1-P Field mustard cytosol 55.32 48.98
Bra025052.1-P Field mustard cytosol 54.17 48.65
Bra027311.1-P Field mustard cytosol 41.2 48.5
Bra028912.1-P Field mustard cytosol 41.2 48.24
Bra022794.1-P Field mustard cytosol 47.22 47.78
Bra013340.1-P Field mustard cytosol 54.4 47.57
Bra005447.1-P Field mustard cytosol, mitochondrion, plastid 53.94 47.36
Bra032042.1-P Field mustard cytosol 50.23 47.07
Bra018319.1-P Field mustard cytosol 48.15 47.06
Bra005446.1-P Field mustard mitochondrion 52.08 46.3
Bra010841.1-P Field mustard cytosol, plastid 55.56 45.8
Bra021897.1-P Field mustard plastid 52.31 44.14
Bra005103.1-P Field mustard cytosol 42.36 42.86
Bra000066.1-P Field mustard cytosol 41.44 41.63
Os09t0418500-00 Rice extracellular 53.94 28.84
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.200.20Gene3D:3.30.310.80EnsemblPlantsGene:Bra010263EnsemblPlants:Bra010263.1EnsemblPlants:Bra010263.1-P
InterPro:Ca/CaM-dep_Ca-dep_prot_KinaseGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR018451InterPro:Kinase-like_dom_sfUniProt:M4D1B4InterPro:NAF/FISL_domain
InterPro:NAF_domPFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PFscan:PS50816PANTHER:PTHR43895PANTHER:PTHR43895:SF8InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0002546EF1SEG:seg:
Description
AT4G30960 (E=2e-153) CIPK6, SIP3, SNRK3.14, ATCIPK6 | SIP3 (SOS3-INTERACTING PROTEIN 3); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase
Coordinates
chrA08:-:13506277..13507575
Molecular Weight (calculated)
48464.6 Da
IEP (calculated)
9.425
GRAVY (calculated)
-0.303
Length
432 amino acids
Sequence
(BLAST)
001: MVGAKPVKTM EKGSDGAGLL HGRYELGRLL GHGTFAKVYH ARNVTTGKSM AMKVVAKEKV IKVGMVEQIK REISVMSMVK HPNIVELHEV MASKSKIYFA
101: MELVRGGELF AKISKGRLRE DVARVYFQQL ISAVDFCHSR GVYHRDLKPE NLLLDEEGNL KVTDFGLSAL TEHLKQDGLF HTTCGTPAYV APEVILKKGY
201: DGAKADLWSC GVILFVLLAG YLPFQDDNLV NMYRKIYRGD FKCPGWLSSD ARKLVTKLLD PNPNTRITID KVMDSAWFKK HSTRSKNEAE DLDISVHKSK
301: EETETLNAFH IIALSEGFDL SPLFEEKKKE EKREMRFATS RPASSVISSL EEAARVGDKF DVRKSESRVR IEGKQNGRKG KLAVEAEIFA VAPSFVVVEV
401: KKDHGDTLEY NNFCSTALRP ALKDIFWTST PV
Best Arabidopsis Sequence Match ( AT4G30960.1 )
(BLAST)
001: MVGAKPVENG SDGGSSTGLL HGRYELGRLL GHGTFAKVYH ARNIQTGKSV AMKVVGKEKV VKVGMVDQIK REISVMRMVK HPNIVELHEV MASKSKIYFA
101: MELVRGGELF AKVAKGRLRE DVARVYFQQL ISAVDFCHSR GVYHRDLKPE NLLLDEEGNL KVTDFGLSAF TEHLKQDGLL HTTCGTPAYV APEVILKKGY
201: DGAKADLWSC GVILFVLLAG YLPFQDDNLV NMYRKIYRGD FKCPGWLSSD ARRLVTKLLD PNPNTRITIE KVMDSPWFKK QATRSRNEPV AATITTTEED
301: VDFLVHKSKE ETETLNAFHI IALSEGFDLS PLFEEKKKEE KREMRFATSR PASSVISSLE EAARVGNKFD VRKSESRVRI EGKQNGRKGK LAVEAEIFAV
401: APSFVVVEVK KDHGDTLEYN NFCSTALRPA LKDIFWTSTP A
Arabidopsis Description
CIPK6CBL-interacting serine/threonine-protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65554]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.