Factsheet for Bra013340.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003649.1-P
Bra008355.1-P
Bra012325.1-P
Bra016380.1-P
Bra017504.1-P
Bra022104.1-P
Bra028187.1-P
Bra028409.1-P
Bra028949.1-P
Bra035027.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18700.1	Bra003649.1-P	AT1G78300.1	21798944
AT4G18700.1	Bra008355.1-P	AT1G78300.1	21798944
AT4G18700.1	Bra012325.1-P	AT1G78300.1	21798944
AT4G18700.1	Bra016380.1-P	AT1G78300.1	21798944
AT4G18700.1	Bra035027.1-P	AT1G78300.1	21798944
AT4G18700.1	Bra028187.1-P	AT5G38480.1	21798944
AT4G18700.1	Bra028409.1-P	AT5G38480.1	21798944
AT4G18700.1	Bra017504.1-P	AT5G47100.1	14730064
AT4G18700.1	Bra022104.1-P	AT5G47100.1	14730064
AT4G18700.1	Bra028949.1-P	AT5G55990.1	11230129
AT4G18700.1	Bra028949.1-P	AT5G55990.1	14730130
AT4G18700.1	Bra028949.1-P	AT5G55990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78885	Canola	cytosol	94.33	99.79
AT4G18700.1	Thale cress	cytosol	91.3	92.23
Bra020996.1-P	Field mustard	cytosol	90.28	91.39
VIT_10s0003g01420.t01	Wine grape	cytosol	77.33	81.28
Bra025052.1-P	Field mustard	cytosol	76.52	78.59
Solyc02g072530.1.1	Tomato	cytosol	73.89	76.36
PGSC0003DMT400073132	Potato	cytosol	73.68	76.15
KRH11038	Soybean	cytosol	75.71	73.33
KRH21248	Soybean	cytosol	75.3	72.66
GSMUA_Achr6P14530_001	Banana	cytosol, mitochondrion	57.49	70.82
KRH58970	Soybean	cytosol	72.27	69.05
KRH42869	Soybean	cytosol	73.08	68.37
HORVU6Hr1G054210.3	Barley	cytosol	58.3	65.75
Bra005447.1-P	Field mustard	cytosol, mitochondrion, plastid	64.98	65.24
Bra005446.1-P	Field mustard	mitochondrion	64.17	65.23
Bra010841.1-P	Field mustard	cytosol, plastid	68.83	64.89
Zm00001d038690_P001	Maize	cytosol	64.37	63.22
OQU78296	Sorghum	plastid	64.17	62.65
Os05t0514200-01	Rice	cytosol, plastid	63.97	62.2
Bra021897.1-P	Field mustard	plastid	64.37	62.11
Zm00001d010743_P001	Maize	cytosol, plastid	63.56	61.69
HORVU1Hr1G076910.3	Barley	cytosol, plastid	62.96	60.98
TraesCS3A01G305900.1	Wheat	plastid	63.97	60.54
EES03646	Sorghum	plastid	63.36	60.31
TraesCS1B01G347100.1	Wheat	plastid	63.16	60.12
TraesCS1A01G333800.1	Wheat	plastid	63.16	59.88
TraesCS3B01G330600.1	Wheat	plastid	63.36	59.62
Os01t0759400-02	Rice	cytosol, plastid	62.75	57.41
Zm00001d012696_P001	Maize	plastid	59.92	57.25
Zm00001d043389_P003	Maize	cytosol, plastid	62.75	56.57
Os01t0206300-00	Rice	cytosol	58.5	56.56
TraesCS3D01G296000.1	Wheat	plastid	40.28	56.37
EES02274	Sorghum	cytosol	58.5	56.23
Bra021992.1-P	Field mustard	cytosol	49.39	56.09
HORVU3Hr1G025810.1	Barley	cytosol	57.29	55.38
Bra027311.1-P	Field mustard	cytosol	40.69	54.77
TraesCS3B01G153800.1	Wheat	mitochondrion	57.49	54.72
Bra011236.1-P	Field mustard	cytosol	48.79	54.65
TraesCS3D01G136700.1	Wheat	mitochondrion	57.49	54.62
Bra024032.1-P	Field mustard	cytosol	48.18	54.46
Bra010263.1-P	Field mustard	cytosol	47.57	54.4
HORVU3Hr1G073100.2	Barley	cytosol	63.36	54.34
Zm00001d008899_P001	Maize	cytosol	56.48	54.17
TraesCS3A01G135700.1	Wheat	mitochondrion	57.09	54.02
Bra022794.1-P	Field mustard	cytosol	46.56	53.86
Bra020371.1-P	Field mustard	cytosol	47.57	53.05
Bra018319.1-P	Field mustard	cytosol	46.96	52.49
Bra009293.1-P	Field mustard	cytosol	49.39	52.47
Bra002654.1-P	Field mustard	cytosol	48.99	52.38
Bra021628.1-P	Field mustard	cytosol	40.08	51.7
Bra028709.1-P	Field mustard	cytosol	45.14	50.8
Bra009003.1-P	Field mustard	cytosol	44.53	50.69
Bra009294.1-P	Field mustard	cytosol	45.14	50.68
Bra028912.1-P	Field mustard	cytosol	37.85	50.68
Bra005103.1-P	Field mustard	cytosol	43.52	50.35
Bra000066.1-P	Field mustard	cytosol	43.32	49.77
Bra025051.1-P	Field mustard	cytosol	34.21	48.01
Bra032042.1-P	Field mustard	cytosol	42.51	45.55

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.310.80	EnsemblPlantsGene:Bra013340	EnsemblPlants:Bra013340.1	EnsemblPlants:Bra013340.1-P	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	UniProt:M4DA30	InterPro:NAF/FISL_domain	InterPro:NAF_dom
PFAM:PF00069	PFAM:PF03822	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816
PANTHER:PTHR43895	PANTHER:PTHR43895:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000254626B	SEG:seg	:	:	:

Description

AT4G18700 (E=4e-246) CIPK12, SnRK3.9, ATWL4, WL4 | CIPK12 (CBL-INTERACTING PROTEIN KINASE 12); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA01:-:5094250..5095734

Molecular Weight (calculated)

55314.5 Da

IEP (calculated)

7.170

GRAVY (calculated)

-0.259

Length

494 amino acids

Sequence
(BLAST)

001: MAELTKETSL PKERSSPSPQ ALILGRYEMG KLLGHGTFAK VYLARNVKTN ESVAIKVIDK EKILKGGLIA HIKREISILR RVRHPNIVQL FEVMATKAKI
101: YFVMEYVRGG ELFNKVAKGR LKEEVARKYF QQLISAVTFC HARGVFHRDI KPENLLLDEN GNLKVSDFGL SAVSDQIRQD GLFHTFCGTP AYVAPEVLAR
201: KGYDAGKVDI WSCGVVLFVL MAGYLPFHDR NVMAMYKKIY KGEFRCPRWF SPELTRLCSR LLETNPEKRF TFPEIMENSW FKKGFKHVKF YVEDDKLCNV
301: VDDDDDELET GSVESDRSST VSESDVEFFK PARRVGGLPR PASLNAFDII SFSQGFDLSG LFDDDGEGSR FVSGAPVSKI ISKLEEIAKV VSFTVRKKDC
401: RVSLEGSRQG VKGPLTIAAE IFELTPSLVV VEVKKKGGDR TEYEEFCNKE LKPKLQNLTA DDEVDEPVAA SAVDETASGV ANSPPVCFLP SDTE

Best Arabidopsis Sequence Match ( AT4G18700.1 )
(BLAST)

001: MAEKITRETS LPKERSSPQA LILGRYEMGK LLGHGTFAKV YLARNVKTNE SVAIKVIDKE KVLKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE

Arabidopsis Description

CIPK12CBL-interacting serine/threonine-protein kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.