Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH21248 | Soybean | cytosol | 96.27 | 95.9 |
VIT_10s0003g01420.t01 | Wine grape | cytosol | 74.51 | 80.85 |
CDY69878 | Canola | cytosol | 67.45 | 79.81 |
CDX78885 | Canola | cytosol | 71.18 | 77.73 |
CDX99438 | Canola | cytosol | 70.59 | 76.92 |
Bra020996.1-P | Field mustard | cytosol | 73.33 | 76.64 |
AT4G18700.1 | Thale cress | cytosol | 72.94 | 76.07 |
Bra013340.1-P | Field mustard | cytosol | 73.33 | 75.71 |
Solyc02g072530.1.1 | Tomato | cytosol | 70.59 | 75.31 |
PGSC0003DMT400073132 | Potato | cytosol | 70.39 | 75.1 |
CDY67623 | Canola | cytosol | 66.67 | 75.06 |
KRH58970 | Soybean | cytosol | 76.08 | 75.05 |
Bra025052.1-P | Field mustard | cytosol | 69.41 | 73.6 |
CDY70469 | Canola | cytosol | 69.22 | 73.54 |
AT5G45810.1 | Thale cress | cytosol | 69.61 | 73.5 |
KRH42869 | Soybean | cytosol | 76.08 | 73.48 |
GSMUA_Achr6P14530_001 | Banana | cytosol, mitochondrion | 55.1 | 70.07 |
HORVU6Hr1G054210.3 | Barley | cytosol | 59.22 | 68.95 |
Zm00001d038690_P001 | Maize | cytosol | 65.49 | 66.4 |
OQU78296 | Sorghum | plastid | 65.1 | 65.61 |
Os05t0514200-01 | Rice | cytosol, plastid | 64.51 | 64.76 |
Zm00001d010743_P001 | Maize | cytosol, plastid | 64.51 | 64.64 |
HORVU1Hr1G076910.3 | Barley | cytosol, plastid | 63.53 | 63.53 |
TraesCS1B01G347100.1 | Wheat | plastid | 63.14 | 62.04 |
EES03646 | Sorghum | plastid | 63.14 | 62.04 |
TraesCS1A01G333800.1 | Wheat | plastid | 63.14 | 61.8 |
TraesCS3A01G305900.1 | Wheat | plastid | 62.94 | 61.49 |
CDY34052 | Canola | cytosol | 60.78 | 61.26 |
TraesCS3B01G330600.1 | Wheat | plastid | 62.75 | 60.95 |
Zm00001d012696_P001 | Maize | plastid | 59.8 | 58.99 |
Zm00001d043389_P003 | Maize | cytosol, plastid | 62.55 | 58.21 |
HORVU3Hr1G025810.1 | Barley | cytosol | 57.84 | 57.73 |
TraesCS3B01G153800.1 | Wheat | mitochondrion | 58.24 | 57.23 |
TraesCS3D01G296000.1 | Wheat | plastid | 39.61 | 57.22 |
Os01t0759400-02 | Rice | cytosol, plastid | 60.39 | 57.04 |
TraesCS3D01G136700.1 | Wheat | mitochondrion | 58.04 | 56.92 |
KRH03068 | Soybean | cytosol | 47.06 | 56.87 |
EES02274 | Sorghum | cytosol | 57.25 | 56.81 |
Os01t0206300-00 | Rice | cytosol | 56.67 | 56.56 |
TraesCS3A01G135700.1 | Wheat | mitochondrion | 57.65 | 56.32 |
KRH72285 | Soybean | cytosol | 47.06 | 55.81 |
HORVU3Hr1G073100.2 | Barley | cytosol | 62.94 | 55.73 |
KRH12907 | Soybean | cytosol | 47.84 | 55.71 |
Zm00001d008899_P001 | Maize | cytosol | 55.88 | 55.34 |
KRH37909 | Soybean | cytosol | 47.25 | 54.77 |
KRH76102 | Soybean | cytosol | 49.8 | 54.39 |
KRH40770 | Soybean | cytosol | 49.02 | 54.35 |
KRH00415 | Soybean | cytosol | 48.82 | 53.9 |
KRG98172 | Soybean | cytosol | 48.63 | 53.68 |
KRH17163 | Soybean | cytosol | 45.88 | 53.3 |
KRG97651 | Soybean | cytosol | 46.86 | 53.23 |
KRH72812 | Soybean | cytosol | 45.69 | 52.71 |
KRH31221 | Soybean | cytosol | 46.67 | 52.65 |
KRH21249 | Soybean | cytosol | 46.47 | 52.55 |
KRG98160 | Soybean | cytosol | 46.27 | 52.44 |
KRH30131 | Soybean | cytosol | 47.45 | 52.38 |
KRH65452 | Soybean | cytosol | 42.35 | 52.3 |
KRH72808 | Soybean | cytosol | 47.45 | 52.27 |
KRG94820 | Soybean | cytosol | 43.73 | 51.86 |
KRH40763 | Soybean | cytosol | 44.31 | 51.6 |
KRH18584 | Soybean | cytosol | 45.88 | 51.32 |
KRH00424 | Soybean | cytosol | 44.12 | 50.79 |
KRH47346 | Soybean | cytosol | 43.14 | 49.89 |
KRH61670 | Soybean | mitochondrion | 42.16 | 49.54 |
KRH52332 | Soybean | cytosol | 43.92 | 49.45 |
KRH44558 | Soybean | cytosol | 41.57 | 49.3 |
KRH09653 | Soybean | cytosol | 43.73 | 48.37 |
KRH23642 | Soybean | cytosol, nucleus, plastid | 37.45 | 44.94 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr15:-:6445126..6447384
Molecular Weight (calculated)
57272.9 Da
IEP (calculated)
7.194
GRAVY (calculated)
-0.252
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVVSKTPT SSLISPHKKE TSNLLLGRFE IGKLLGHGTF AKVYYARNVK TGEGVAIKVI DKEKILKGGL VAHIKREISI LRRVRHPNIV QLFEVMATKS
101: KIYFVMEYVR GGELFNKVAK GRLKEEVARK YFQQLISAVG FCHARGVYHR DLKPENLLLD ENGNLKVSDF GLSAVSDQIR QDGLFHTFCG TPAYVAPEVL
201: ARKGYDGAKV DLWSCGVVLF VLMAGYLPFH DQNVMAMYKK IYRGEFRCPR WFSPDLSRLL TRLLDTKPET RIAIPEIMEN KWFKKGFKQI KFYVEDDRLC
301: NVVDDDGLMD NDDDTISIAS VATFSDYSVS ESDSEVETRR RNDATLPRPP SLNAFDIISF SPGFDLSGLF EEKGDETRFV TAAPVNRIIS KLEEIAQLVS
401: FSVRKKDCRV SLEGTREGVR GPLTIAAEIF ELTPSLVVVE VKKKGGDRAE YERFCKNELK PGLQNLMVEE SATSSDLSTP TQPSLLRGLS EPVPDISSDI
501: ETPLYIPTDD
101: KIYFVMEYVR GGELFNKVAK GRLKEEVARK YFQQLISAVG FCHARGVYHR DLKPENLLLD ENGNLKVSDF GLSAVSDQIR QDGLFHTFCG TPAYVAPEVL
201: ARKGYDGAKV DLWSCGVVLF VLMAGYLPFH DQNVMAMYKK IYRGEFRCPR WFSPDLSRLL TRLLDTKPET RIAIPEIMEN KWFKKGFKQI KFYVEDDRLC
301: NVVDDDGLMD NDDDTISIAS VATFSDYSVS ESDSEVETRR RNDATLPRPP SLNAFDIISF SPGFDLSGLF EEKGDETRFV TAAPVNRIIS KLEEIAQLVS
401: FSVRKKDCRV SLEGTREGVR GPLTIAAEIF ELTPSLVVVE VKKKGGDRAE YERFCKNELK PGLQNLMVEE SATSSDLSTP TQPSLLRGLS EPVPDISSDI
501: ETPLYIPTDD
001: MAEKITRETS LPKERSSPQA LILGRYEMGK LLGHGTFAKV YLARNVKTNE SVAIKVIDKE KVLKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE
Arabidopsis Description
CIPK12CBL-interacting serine/threonine-protein kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN43]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.