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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G001280.1
HORVU1Hr1G055300.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G011670.1
HORVU4Hr1G026290.3
HORVU4Hr1G090270.10
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G016320.1
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G30960.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT4G30960.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT4G30960.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT4G30960.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT4G30960.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT4G30960.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT4G30960.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT4G30960.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT4G30960.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT4G30960.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT4G30960.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT4G30960.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT4G30960.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT4G30960.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT4G30960.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT4G30960.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
AT4G30960.1 HORVU1Hr1G055300.1 AT5G47100.1 17898163
AT4G30960.1 HORVU4Hr1G090270.10 AT5G47100.1 17898163
AT4G30960.1 HORVU4Hr1G011670.1 AT5G55990.1 11230129
AT4G30960.1 HORVU5Hr1G016320.1 AT5G55990.1 11230129
AT4G30960.1 HORVU4Hr1G011670.1 AT5G55990.1 17898163
AT4G30960.1 HORVU5Hr1G016320.1 AT5G55990.1 17898163
AT4G30960.1 HORVU4Hr1G011670.1 AT5G55990.1 21798944
AT4G30960.1 HORVU5Hr1G016320.1 AT5G55990.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G115400.1 Wheat cytosol 96.15 96.81
TraesCS4D01G113100.1 Wheat cytosol 95.93 96.58
TraesCS4A01G200000.1 Wheat cytosol 95.48 96.13
Zm00001d032155_P001 Maize cytosol 82.58 81.47
EES13913 Sorghum cytosol 83.03 80.31
Zm00001d050422_P001 Maize cytosol 78.96 74.57
HORVU5Hr1G065350.1 Barley cytosol 75.11 74.44
VIT_11s0016g00200.t01 Wine grape cytosol 60.63 62.91
CDY23269 Canola cytosol 56.56 62.81
CDX72282 Canola cytosol 57.24 62.32
CDY13400 Canola cytosol 57.01 62.22
CDY36461 Canola cytosol 56.33 60.73
KRH03068 Soybean cytosol 57.92 60.66
Bra010263.1-P Field mustard cytosol 59.28 60.65
CDX68708 Canola cytosol 56.56 60.1
CDY28231 Canola cytosol 56.56 60.1
Bra024032.1-P Field mustard cytosol 59.28 59.95
KRH72285 Soybean cytosol 57.92 59.53
PGSC0003DMT400029044 Potato cytosol 57.01 59.43
AT4G30960.1 Thale cress cytosol 59.28 59.41
Solyc07g005440.1.1 Tomato cytosol 56.79 59.2
KRH12907 Soybean cytosol 58.6 59.13
Bra011236.1-P Field mustard cytosol 58.82 58.96
KRH37909 Soybean cytosol 58.37 58.64
Solyc12g010130.1.1 Tomato cytosol 57.01 58.33
PGSC0003DMT400020443 Potato cytosol 56.79 58.1
GSMUA_Achr10P... Banana cytosol 55.66 53.95
HORVU2Hr1G018260.1 Barley cytosol 49.55 48.67
HORVU6Hr1G054210.3 Barley cytosol 48.19 48.63
HORVU4Hr1G022630.1 Barley cytosol, mitochondrion 47.06 46.85
HORVU5Hr1G046880.1 Barley cytosol 46.61 46.82
HORVU0Hr1G015380.1 Barley cytosol 49.09 46.67
HORVU3Hr1G073110.1 Barley cytosol 50.45 46.65
HORVU5Hr1G046830.3 Barley cytosol 46.61 46.09
HORVU3Hr1G081420.1 Barley cytosol 49.77 43.22
HORVU1Hr1G076910.3 Barley cytosol, plastid 49.77 43.14
HORVU3Hr1G029350.3 Barley cytosol 53.39 41.92
HORVU1Hr1G070100.9 Barley cytosol 46.83 41.65
HORVU3Hr1G025810.1 Barley cytosol 46.61 40.31
HORVU5Hr1G065370.2 Barley cytosol, plastid 45.48 39.88
HORVU3Hr1G073100.2 Barley cytosol 50.45 38.72
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.200.20Gene3D:3.30.310.80EMBL:AK376685InterPro:Ca/CaM-dep_Ca-dep_prot_KinaseUniProt:F2EKK8
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:HORVU4Hr1G021090EnsemblPlants:HORVU4Hr1G021090.1InterPro:IPR000719InterPro:IPR018451InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domain
InterPro:NAF_domPFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PFscan:PS50816PANTHER:PTHR43895PANTHER:PTHR43895:SF20InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI00020090FDSEG:seg:
Description
Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F2EKK8]
Coordinates
chrchr4H:-:106554652..106556580
Molecular Weight (calculated)
48160.2 Da
IEP (calculated)
9.145
GRAVY (calculated)
-0.180
Length
442 amino acids
Sequence
(BLAST)
001: MADQAEGKKG GVLQGRYEMG RVLGHGNFGR VHIARDLRTG RAVAVKVVAK DKVVRAGMVE QIKREIAVMK RVSHPNIVEL HEVMATRSKI YLALELVRGG
101: ELFARIERSG RVTEDVARRY FRQLISAIDF CHARGVYHRD LKPENLLLDE AGNLKVVDFG LSALADHARA DGLLHTLCGT PGYAAPEVLR DKGYDGAKAD
201: LWSCGVILYV LLAGSLPFPD NNVVTMYKKA QRGDYRCPPW FSTDARRLIP KLLDPDPTTR ITVAQLVETP WFKKTSIAKP VSLGPPADSA CAKDAADKDE
301: PEAMNAFHLI SLSEGFDLSP LFEGHPASRR REGGMRFATR EPATGVVSRL EDVAARGGGR MRVTKSSPGG VRLEGAERGG RKGRLTVAAE IFSVAPSVLV
401: VDVKKDGGDT LEYLSFCCEE LRPALQDIVW AADPPASVAI AV
Best Arabidopsis Sequence Match ( AT4G18700.1 )
(BLAST)
001: MAEKITRETS LPKERSSPQA LILGRYEMGK LLGHGTFAKV YLARNVKTNE SVAIKVIDKE KVLKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE
Arabidopsis Description
CIPK12CBL-interacting serine/threonine-protein kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN43]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.