Factsheet for GSMUA_Achr6P32570_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P17520_001
GSMUA_Achr3P05880_001
GSMUA_Achr4P16890_001
GSMUA_Achr4P21110_001
GSMUA_Achr4P26350_001
GSMUA_Achr4P28510_001
GSMUA_Achr4P30070_001
GSMUA_Achr6P32570_001
GSMUA_Achr7P16760_001
GSMUA_Achr8P01770_001
GSMUA_Achr8P23650_001
GSMUA_Achr9P04780_001
GSMUA_Achr9P12840_001
GSMUA_Achr9P14340_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30360.1	GSMUA_Achr6P32570_001	AT2G30360.1	17785451
AT2G30360.1	GSMUA_Achr8P01770_001	AT2G30360.1	17785451
AT2G30360.1	GSMUA_Achr9P04780_001	AT2G30360.1	17785451
AT2G30360.1	GSMUA_Achr4P26350_001	AT5G47100.1	14730064
AT2G30360.1	GSMUA_Achr4P30070_001	AT5G47100.1	14730064
AT2G30360.1	GSMUA_AchrUn_...	AT5G47100.1	14730064
AT2G30360.1	GSMUA_Achr9P12840_001	AT5G55990.1	11230129
AT2G30360.1	GSMUA_Achr9P12840_001	AT5G55990.1	11402167
AT2G30360.1	GSMUA_Achr9P12840_001	AT5G55990.1	17483306
AT2G38490.1	GSMUA_AchrUn_...	AT2G46550.1	21798944
AT2G38490.1	GSMUA_Achr3P05880_001	AT3G14180.1	21798944
AT2G38490.1	GSMUA_Achr8P23650_001	AT3G14180.1	21798944
AT2G38490.1	GSMUA_Achr9P14340_001	AT3G14180.1	21798944
AT2G38490.1	GSMUA_Achr4P16890_001	AT5G02050.1	21798944
AT5G01820.1	GSMUA_AchrUn_...	AT2G46550.1	21798944
AT5G01820.1	GSMUA_Achr2P17520_001	AT3G22960.1	21798944
AT5G01820.1	GSMUA_Achr4P21110_001	AT3G22960.1	21798944
AT5G01820.1	GSMUA_Achr4P28510_001	AT3G22960.1	21798944
AT5G01820.1	GSMUA_Achr7P16760_001	AT3G22960.1	21798944
AT5G01820.1	GSMUA_Achr9P12840_001	AT5G55990.1	11230129
AT5G01820.1	GSMUA_Achr9P12840_001	AT5G55990.1	11577192
AT5G01820.1	GSMUA_Achr9P12840_001	AT5G55990.1	14730130
AT5G01820.1	GSMUA_Achr9P12840_001	AT5G55990.1	21798944
AT5G01820.1	GSMUA_AchrUn_...	AT5G63310.1	17785451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P04780_001	Banana	cytosol	65.67	67.7
GSMUA_Achr8P01770_001	Banana	cytosol	58.58	62.68
Solyc10g085450.1.1	Tomato	cytosol	42.78	51.82
CDY29680	Canola	cytosol	47.41	45.31
Bra021628.1-P	Field mustard	cytosol	47.14	45.17
CDY54010	Canola	cytosol	46.32	44.39
VIT_06s0004g07870.t01	Wine grape	cytosol	51.5	43.35
Bra028912.1-P	Field mustard	cytosol	43.32	43.09
GSMUA_AchrUn_...	Banana	cytosol	34.06	42.81
CDY04828	Canola	cytosol	50.14	42.69
PGSC0003DMT400028840	Potato	cytosol	50.14	42.2
Bra022794.1-P	Field mustard	cytosol	49.05	42.15
CDX84840	Canola	cytosol	49.05	42.15
GSMUA_Achr2P18880_001	Banana	cytosol	42.23	42.12
CDY24005	Canola	cytosol	48.23	41.94
AT5G01820.1	Thale cress	cytosol	50.14	41.63
KRH17163	Soybean	cytosol	49.59	41.46
KRH72812	Soybean	cytosol	49.86	41.4
GSMUA_Achr6P26810_001	Banana	cytosol	39.78	41.36
GSMUA_Achr7P13860_001	Banana	mitochondrion	41.42	40.75
GSMUA_Achr7P22140_001	Banana	cytosol	40.87	40.65
Bra027311.1-P	Field mustard	cytosol	40.6	40.6
Solyc09g018280.1.1	Tomato	cytosol	48.77	40.41
AT2G30360.1	Thale cress	cytosol, nucleus, plastid	47.68	40.23
PGSC0003DMT400078266	Potato	cytosol	45.78	40.1
CDY68071	Canola	cytosol	47.41	40.09
PGSC0003DMT400056629	Potato	cytosol	49.05	40.0
KRH00424	Soybean	cytosol	48.23	39.95
Solyc06g082440.1.1	Tomato	cytosol	45.5	39.86
GSMUA_Achr8P21320_001	Banana	cytosol	40.05	39.84
Bra018319.1-P	Field mustard	cytosol	47.96	39.82
KRH40763	Soybean	cytosol	47.14	39.5
KRG98160	Soybean	cytosol	48.23	39.33
CDY02060	Canola	cytosol	47.41	39.28
AT2G38490.1	Thale cress	cytosol	46.05	39.21
VIT_08s0058g01090.t01	Wine grape	cytosol	48.77	39.0
GSMUA_Achr7P26970_001	Banana	cytosol	40.87	38.96
KRH18584	Soybean	cytosol	48.23	38.82
PGSC0003DMT400052998	Potato	cytosol	46.87	38.56
Solyc06g007440.2.1	Tomato	cytosol	46.59	38.43
CDX91471	Canola	cytosol	44.41	38.17
CDY65565	Canola	cytosol	44.41	38.17
Bra000066.1-P	Field mustard	cytosol	44.69	38.14
CDY07727	Canola	cytosol	44.69	38.14
GSMUA_Achr10P...	Banana	cytosol	37.33	38.06
Bra005103.1-P	Field mustard	cytosol	44.14	37.94
GSMUA_Achr7P25230_001	Banana	cytosol	36.78	37.82
CDY14457	Canola	cytosol	44.14	37.67
GSMUA_Achr10P...	Banana	cytosol	40.87	37.04
GSMUA_Achr6P14530_001	Banana	cytosol, mitochondrion	39.51	36.16
GSMUA_Achr7P16100_001	Banana	cytosol	38.96	36.11
GSMUA_Achr9P13300_001	Banana	cytosol	38.69	36.04
GSMUA_Achr7P05210_001	Banana	cytosol	38.42	35.97
GSMUA_Achr8P27320_001	Banana	cytosol, plastid	36.78	35.71
GSMUA_Achr10P...	Banana	cytosol	41.14	33.11
GSMUA_Achr6P08690_001	Banana	cytosol	37.06	33.01
GSMUA_Achr6P15810_001	Banana	cytosol	43.6	29.74
GSMUA_Achr5P04480_001	Banana	cytosol, nucleus, plasma membrane	36.51	20.81

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
Gene3D:3.30.200.20	Gene3D:3.30.310.80	MapMan:50.2.7	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr6G32570_001	EnsemblPlants:GSMUA_Achr6P32570_001	EnsemblPlants:GSMUA_Achr6T32570_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TC51
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR43895	PANTHER:PTHR43895:SF22
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295BE2A	:

Description

CAMK_KIN1/SNF1/Nim1_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G32570_001]

Coordinates

chr6:-:31926250..31928182

Molecular Weight (calculated)

40712.2 Da

IEP (calculated)

10.404

GRAVY (calculated)

-0.299

Length

367 amino acids

Sequence
(BLAST)

001: MTDFSGSAPP AKVIFGKYEL GRLFGRGASA KVYHARHVSS GHGVAIKVFA NPRHHADGGS FIREILALRR LRHPYIVRVH ELLASRSKVY LVLELAKGGE
101: LFSRVEDRGR LPEDLCRRIF RQLISAVTYC HSLGVFHRDL KPENLLLDDA GDLKVSDFGL AALGRTSSEG NDGNHPLHTQ CGTPAYVAPE ILSRKKTGRY
201: DGAKADTCAS HCVPKQGVIL FVLNAGYLPF NDPNLSSLYC KIYRGHHHRP RWTSLALRRL IVRLLDPNPA TRISIDGIRL RPLSDSHRPS RQTRSWTESS
301: RKGEGLVVKR ESEKGLSAVV EGQNGEFILR VEIYQLTNGV AVVEVEKGIG AAGRLWKEKL RPANLGL

Best Arabidopsis Sequence Match ( AT1G30270.1 )
(BLAST)

001: MASRTTPSRS TPSRSTPSGS SSGGRTRVGK YELGRTLGEG TFAKVKFARN VENGDNVAIK VIDKEKVLKN KMIAQIKREI STMKLIKHPN VIRMFEVMAS
101: KTKIYFVLEF VTGGELFDKI SSNGRLKEDE ARKYFQQLIN AVDYCHSRGV YHRDLKPENL LLDANGALKV SDFGLSALPQ QVREDGLLHT TCGTPNYVAP
201: EVINNKGYDG AKADLWSCGV ILFVLMAGYL PFEDSNLTSL YKKIFKAEFT CPPWFSASAK KLIKRILDPN PATRITFAEV IENEWFKKGY KAPKFENADV
301: SLDDVDAIFD DSGESKNLVV ERREEGLKTP VTMNAFELIS TSQGLNLGSL FEKQMGLVKR KTRFTSKSSA NEIVTKIEAA AAPMGFDVKT NNYKMKLTGE
401: KSGRKGQLAV ATEVFQVAPS LYMVEMRKSG GDTLEFHKFY KNLTTGLKDI VWKTIDEEKE EGTDGGGTNG AMANRTIAKQ ST

Arabidopsis Description

CIPK23CBL-interacting serine/threonine-protein kinase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q93VD3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.