Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- plastid 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P14340_001 | Banana | nucleus | 72.43 | 68.23 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 66.28 | 55.94 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 33.43 | 46.15 |
| GSMUA_Achr5P09160_001 | Banana | nucleus | 32.55 | 44.05 |
| GSMUA_Achr1P27460_001 | Banana | nucleus | 32.26 | 43.14 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 34.02 | 42.96 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 31.96 | 41.92 |
| GSMUA_Achr9P04510_001 | Banana | nucleus | 31.38 | 40.23 |
| KRH47662 | Soybean | nucleus, plastid | 41.35 | 38.32 |
| CDY33246 | Canola | nucleus | 34.02 | 37.91 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 40.18 | 37.64 |
| KRH06239 | Soybean | nucleus | 39.88 | 36.76 |
| Solyc03g122030.1.1 | Tomato | nucleus | 38.71 | 36.36 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 39.0 | 35.66 |
| CDY39101 | Canola | nucleus, plastid | 31.67 | 35.41 |
| Bra021536.1-P | Field mustard | nucleus | 31.67 | 35.29 |
| Bra021534.1-P | Field mustard | nucleus, plastid | 31.38 | 34.52 |
| CDY39099 | Canola | nucleus | 31.96 | 34.38 |
| CDY61477 | Canola | nucleus, plastid | 29.62 | 33.55 |
| Bra037960.1-P | Field mustard | nucleus, plastid | 29.62 | 33.55 |
| TraesCS6A01G198600.1 | Wheat | nucleus, plastid | 36.36 | 33.51 |
| Os04t0445600-00 | Rice | nucleus | 40.47 | 33.09 |
| EES12241 | Sorghum | nucleus | 39.59 | 33.09 |
| CDX75751 | Canola | nucleus | 35.78 | 32.8 |
| Zm00001d003549_P001 | Maize | nucleus | 36.95 | 32.73 |
| Zm00001d025514_P001 | Maize | nucleus | 37.54 | 32.65 |
| TraesCS2D01G311800.1 | Wheat | nucleus, plastid | 39.0 | 32.2 |
| TraesCS2B01G332100.1 | Wheat | nucleus, plastid | 39.0 | 31.97 |
| TraesCS2A01G313300.1 | Wheat | nucleus, plastid | 39.0 | 31.97 |
| CDY02487 | Canola | nucleus, plastid | 28.74 | 31.82 |
| Zm00001d016876_P001 | Maize | nucleus, plastid | 37.24 | 31.59 |
| CDY08216 | Canola | nucleus | 29.91 | 31.1 |
| Os02t0565000-01 | Rice | nucleus | 38.12 | 31.03 |
| Bra014370.1-P | Field mustard | nucleus | 30.21 | 30.75 |
| TraesCS6B01G230000.1 | Wheat | nucleus | 37.24 | 30.53 |
| Zm00001d010753_P001 | Maize | nucleus | 29.33 | 30.49 |
| TraesCS6D01G184500.2 | Wheat | nucleus | 36.95 | 30.29 |
| HORVU6Hr1G050140.1 | Barley | nucleus, plastid | 36.95 | 30.14 |
| CDY51405 | Canola | nucleus | 11.14 | 29.92 |
| KXG30464 | Sorghum | nucleus, plastid | 36.07 | 29.15 |
| CDY26148 | Canola | nucleus, plastid | 30.5 | 29.13 |
| Bra030909.1-P | Field mustard | nucleus | 10.85 | 28.91 |
| AT3G14180.1 | Thale cress | nucleus | 37.24 | 28.67 |
| AT1G54060.1 | Thale cress | nucleus | 28.74 | 25.59 |
| HORVU2Hr1G077940.1 | Barley | cytosol, nucleus, plastid | 14.66 | 22.32 |
| CDY33093 | Canola | cytosol, plastid | 28.45 | 22.2 |
| GSMUA_Achr8P04010_001 | Banana | nucleus | 16.72 | 16.33 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 31.67 | 16.27 |
| GSMUA_Achr8P26150_001 | Banana | nucleus | 16.13 | 15.71 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P23650_001 | EnsemblPlants:GSMUA_Achr8T23650_001 | EnsemblPlantsGene:GSMUA_Achr8G23650_001 | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF12 | PFAM:PF13837 |
| SEG:seg | UniParc:UPI00029523F2 | UniProt:M0TT18 | MapMan:15.5.20 | : | : |
Description
transcription factor like protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G23650_001]
Coordinates
chr8:+:28054881..28056197
Molecular Weight (calculated)
37316.1 Da
IEP (calculated)
7.246
GRAVY (calculated)
-0.997
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDDDDAQSP SRSLSQSPSP PPVSVVPPSS SPSASPHQPN GRIDEPVTVA AAPQHAVPIR QLRASPGPAS GGGREDCWSD GATSALIDAW GERYLELSRG
101: NLKQKQWQEV ADAVTSRDGY TKAPKTDVQC KNRIDTLKKK YKIEKSKISS SAGGATPSWP FFHRLDLLLG PTHKPAPPPP SSTIPAGVRS SPALASKSAG
201: SSADSSDGFP PPPPKEANGK RLHQEPVEEE GEEQRTADLR ELAQAILKFG EVYERVESSK LRQAMEMEKQ RLEFTRELEL QRMEFLMKTQ MELSQLRSHH
301: HGNSRKRKFD DAGGSSNHHH HHRNHDDNNN SSNSNISGND G
101: NLKQKQWQEV ADAVTSRDGY TKAPKTDVQC KNRIDTLKKK YKIEKSKISS SAGGATPSWP FFHRLDLLLG PTHKPAPPPP SSTIPAGVRS SPALASKSAG
201: SSADSSDGFP PPPPKEANGK RLHQEPVEEE GEEQRTADLR ELAQAILKFG EVYERVESSK LRQAMEMEKQ RLEFTRELEL QRMEFLMKTQ MELSQLRSHH
301: HGNSRKRKFD DAGGSSNHHH HHRNHDDNNN SSNSNISGND G
001: METTTPQSKS SVSHRPPLGR EDWWSEEATA TLVEAWGNRY VKLNHGNLRQ NDWKDVADAV NSRHGDNSRK KTDLQCKNRV DTLKKKYKTE KAKLSPSTWR
101: FYNRLDVLIG PVVKKSAGGV VKSAPFKNHL NPTGSNSTGS SLEDDDEDDD EVGDWEFVAR KHPRVEEVDL SEGSTCRELA TAILKFGEVY ERIEGKKQQM
201: MIELEKQRME VTKEVELKRM NMLMEMQLEI EKSKHRKRAS ASGKKNSH
101: FYNRLDVLIG PVVKKSAGGV VKSAPFKNHL NPTGSNSTGS SLEDDDEDDD EVGDWEFVAR KHPRVEEVDL SEGSTCRELA TAILKFGEVY ERIEGKKQQM
201: MIELEKQRME VTKEVELKRM NMLMEMQLEI EKSKHRKRAS ASGKKNSH
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:F4K0Q7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.