Factsheet for GSMUA_Achr8P28640_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr8P19010_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01690.1	GSMUA_Achr11P...	AT4G39050.1	21798944
AT3G01690.1	GSMUA_Achr11P...	AT5G28900.1	21798944
AT3G01690.1	GSMUA_Achr8P19010_001	AT5G28900.1	21798944
AT3G01690.1	GSMUA_AchrUn_...	AT5G28900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P17130_001	Banana	plastid	91.83	91.83
GSMUA_Achr9P02010_001	Banana	plastid	85.29	85.29
GSMUA_Achr9P07620_001	Banana	plastid	84.74	84.51
CDY31930	Canola	cytosol	13.9	79.69
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	76.57	76.36
KRH07089	Soybean	cytosol	76.29	76.09
CDY37505	Canola	cytosol, extracellular	13.62	74.63
Solyc02g067920.2.1	Tomato	cytosol	74.93	74.32
KRH58237	Soybean	cytosol	73.84	73.84
KRG93968	Soybean	cytosol	73.84	73.84
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	73.57	73.57
PGSC0003DMT400017818	Potato	cytosol	74.11	73.32
Os12t0286600-01	Rice	cytosol, plastid	74.93	72.94
GSMUA_Achr9P22720_001	Banana	plastid	20.16	72.55
PGSC0003DMT400039199	Potato	cytosol	73.3	72.51
Zm00001d030601_P001	Maize	plastid	72.21	72.21
AT4G24760.1	Thale cress	cytosol, nucleus, plastid	71.66	72.05
Solyc03g111770.2.1	Tomato	cytosol	72.75	71.97
CDY03421	Canola	cytosol	70.3	71.87
Bra013831.1-P	Field mustard	cytosol	70.84	71.04
CDY34308	Canola	cytosol	70.84	71.04
VIT_17s0000g09740.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	74.11	70.28
CDX91066	Canola	plastid	62.4	69.82
AT3G01690.1	Thale cress	cytosol, plastid	68.39	69.53
KRH54278	Soybean	endoplasmic reticulum	71.39	68.77
KRH63667	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	70.84	68.42
CDY32850	Canola	cytosol	62.94	67.15
KRH03885	Soybean	cytosol, plastid	67.85	67.12
CDY37504	Canola	cytosol	13.9	67.11
Bra008761.1-P	Field mustard	endoplasmic reticulum	67.57	67.03
CDY09851	Canola	plastid	67.57	67.03
AT5G14390.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	67.3	66.94
KRH57170	Soybean	plastid	67.57	66.85
CDX69584	Canola	endoplasmic reticulum	67.3	66.76
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	64.85	65.93
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	64.85	65.93
KRG94364	Soybean	cytosol	24.25	64.03
GSMUA_Achr10P...	Banana	plastid	59.95	62.15
CDX85599	Canola	cytosol	44.14	62.07
GSMUA_Achr8P17940_001	Banana	plastid	57.22	61.22
CDX77081	Canola	plastid	35.15	61.14
CDY11031	Canola	cytosol, plastid	39.78	61.09
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	62.67	59.74
CDX92650	Canola	cytosol	70.03	59.22
Bra023463.1-P	Field mustard	cytosol	44.14	58.91
GSMUA_Achr11P...	Banana	cytosol	46.59	57.97
GSMUA_Achr5P04500_001	Banana	cytosol	46.05	57.29
GSMUA_Achr3P04580_001	Banana	cytosol	45.5	56.61
GSMUA_Achr9P13240_001	Banana	cytosol	45.5	56.61
Bra040701.1-P	Field mustard	plastid	49.05	55.38
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	46.87	52.6
GSMUA_Achr1P06250_001	Banana	plastid	44.14	48.07
KRG99188	Soybean	extracellular	13.35	46.67
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	42.78	46.04
Bra019211.1-P	Field mustard	nucleus	69.21	46.01
CDY53272	Canola	plastid	19.62	45.86
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	29.16	38.63
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	19.07	36.65

Protein Annotations

EnsemblPlants:GSMUA_Achr8P28640_001	EnsemblPlants:GSMUA_Achr8T28640_001	EnsemblPlantsGene:GSMUA_Achr8G28640_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002958F0B	UniProt:M0TUG7	MapMan:35.2	:	:	:

Description

Abhydrolase domain-containing protein FAM108C1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G28640_001]

Coordinates

chr8:+:31377999..31383596

Molecular Weight (calculated)

42116.2 Da

IEP (calculated)

9.150

GRAVY (calculated)

-0.582

Length

367 amino acids

Sequence
(BLAST)

001: MGGVTSSVAA KLAFFPPSPP SYEVVTEPES GVVRLSRYPH RENVEVLRLP TRRGTEIVAL YVRNPMAAFT VLYSHGNAAD LGQMYELFLE LSIHLRVNLL
101: GYDYSGYGQS SGKPTEQNTY ADIETAYKCL VENYGAKEEE IILYGQSVGS GPTVDLAARL PHFRAIMLHS PILSGLRVMY PVKRTYWFDI YKNIDKISLV
201: NCPVLVIHGT SDEVVDFSHG KKLWELCNEK YEPLWLKGGK HCDLELFPEY LKHIKKFIST VEKSPSQRST WRKSAEQFEP PRKSTDCFEP SRKSIDRREK
301: SRQSTEKSRS KDQRTTNVEN LEKLKISFDQ MEKSRRSLDC FDKSRKNIDQ LDRGRKSVDR LDRIWAG

Best Arabidopsis Sequence Match ( AT4G24760.1 )
(BLAST)

001: MGGVTSSMAA KLAFFPPNPP SYKLVRDETT ELFLMSPFPH RENVDILRLP TRRGTEIVAM YIRYPMAVTT LLYSHGNAAD IGQMYELFIE LSIHLRVNLM
101: GYDYSGYGQS SGKPTEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKITLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGC EQPPRHSVDA PRKSKDGREK
301: PRKSIDRLRF QGYKLSHIEK PEKLKVPFEE MERSRRSVDI YRDKSQPMER ARKSVDWLDR SRATE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB70]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.