Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P04500_001 | Banana | cytosol | 89.49 | 89.49 |
| GSMUA_Achr9P13240_001 | Banana | cytosol | 87.12 | 87.12 |
| GSMUA_Achr3P04580_001 | Banana | cytosol | 84.41 | 84.41 |
| VIT_11s0149g00410.t01 | Wine grape | cytosol | 56.61 | 80.68 |
| TraesCS6A01G360000.1 | Wheat | cytosol | 72.54 | 77.54 |
| KRH20089 | Soybean | cytosol | 76.61 | 77.13 |
| TraesCS6D01G343000.1 | Wheat | cytosol | 72.54 | 76.98 |
| TraesCS6B01G392900.1 | Wheat | cytosol | 72.54 | 76.98 |
| Os02t0796600-01 | Rice | cytosol | 68.81 | 76.89 |
| HORVU6Hr1G085730.5 | Barley | mitochondrion | 65.42 | 76.89 |
| Bra024028.1-P | Field mustard | cytosol | 76.27 | 76.53 |
| CDY13406 | Canola | cytosol | 75.93 | 76.19 |
| CDY28238 | Canola | cytosol | 75.59 | 75.85 |
| Bra011242.1-P | Field mustard | cytosol | 75.59 | 75.85 |
| CDX72285 | Canola | cytosol | 75.25 | 75.51 |
| CDX68717 | Canola | cytosol | 75.25 | 75.51 |
| AT4G31020.2 | Thale cress | cytosol | 74.92 | 75.17 |
| KRH12940 | Soybean | cytosol | 75.59 | 75.08 |
| CDY51485 | Canola | cytosol | 74.24 | 74.49 |
| CDY23273 | Canola | cytosol | 73.9 | 74.15 |
| Bra010259.1-P | Field mustard | cytosol | 73.9 | 74.15 |
| Solyc07g005130.2.1 | Tomato | cytosol | 73.56 | 73.56 |
| PGSC0003DMT400008297 | Potato | cytosol | 73.56 | 73.56 |
| CDY55247 | Canola | cytosol | 72.88 | 73.13 |
| CDY34778 | Canola | cytosol | 72.54 | 72.79 |
| Bra007861.1-P | Field mustard | cytosol | 72.54 | 72.79 |
| VIT_11s0206g00050.t01 | Wine grape | cytosol | 58.64 | 72.08 |
| KXG31273 | Sorghum | plastid | 73.9 | 71.71 |
| CDY20302 | Canola | cytosol | 63.73 | 71.21 |
| Bra032105.1-P | Field mustard | cytosol | 69.15 | 69.39 |
| AT2G24320.2 | Thale cress | cytosol | 68.81 | 69.28 |
| CDY20301 | Canola | cytosol | 68.81 | 68.81 |
| CDY46139 | Canola | cytosol | 54.92 | 64.29 |
| GSMUA_Achr9P22720_001 | Banana | plastid | 18.31 | 52.94 |
| GSMUA_Achr8P17940_001 | Banana | plastid | 59.66 | 51.31 |
| GSMUA_Achr1P06250_001 | Banana | plastid | 58.31 | 51.04 |
| GSMUA_Achr7P17430_001 | Banana | cytosol, plastid | 58.31 | 50.44 |
| GSMUA_Achr9P02010_001 | Banana | plastid | 59.66 | 47.96 |
| GSMUA_Achr9P07620_001 | Banana | plastid | 59.66 | 47.83 |
| GSMUA_Achr3P17130_001 | Banana | plastid | 59.32 | 47.68 |
| GSMUA_Achr10P... | Banana | plastid | 56.95 | 47.46 |
| GSMUA_Achr8P28640_001 | Banana | plastid | 57.97 | 46.59 |
| GSMUA_Achr3P28090_001 | Banana | cytosol, nucleus, plastid | 58.31 | 44.68 |
| GSMUA_Achr1P06210_001 | Banana | extracellular, plasma membrane | 41.02 | 43.68 |
| GSMUA_Achr1P06220_001 | Banana | cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid | 25.42 | 39.27 |
| GSMUA_Achr9P22710_001 | Banana | endoplasmic reticulum, golgi | 41.69 | 37.61 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P09910_001 | EnsemblPlants:GSMUA_Achr11T09910_001 | EnsemblPlantsGene:GSMUA_Achr11G09910_001 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 |
| InterPro:IPR029058 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | PFAM:PF12146 | SEG:seg | SUPFAM:SSF53474 |
| UniParc:UPI000295362E | UniProt:M0RQX1 | MapMan:35.2 | : | : | : |
Description
Putative Abhydrolase domain-containing protein FAM108C1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G09910_001]
Coordinates
chr11:-:7729579..7733211
Molecular Weight (calculated)
33320.4 Da
IEP (calculated)
9.045
GRAVY (calculated)
-0.140
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNVTSSVAA RFAFFPPEPA TYEVFREGGG EGPLCLSRLP PGKNVEVHLV ETKAGNRVVA TFWRHPLARF TLLYSHGNAA DLGQMLDLFH ELRSHLRVNI
101: MSYDYSGYGA STGKPSEFNT YYDIEAVYDC LMKEYEIKQE DLILYGQSVG SGPTLHLAAR LQKLGGVVLH SAILSGIRVL YPVKVTLWFD IFKNIDKIRQ
201: VNCPVLVIHG TSDEIVDWTH GKRLWELSKE KYDPLWIKGG GHCNLETFPQ FIKHLRKFIN AMEKLTLVKQ ITQSSLSISA VTEVKYNKCL RLGKR
101: MSYDYSGYGA STGKPSEFNT YYDIEAVYDC LMKEYEIKQE DLILYGQSVG SGPTLHLAAR LQKLGGVVLH SAILSGIRVL YPVKVTLWFD IFKNIDKIRQ
201: VNCPVLVIHG TSDEIVDWTH GKRLWELSKE KYDPLWIKGG GHCNLETFPQ FIKHLRKFIN AMEKLTLVKQ ITQSSLSISA VTEVKYNKCL RLGKR
001: MGNVTSNVAA KFAFFPPEPA TYGVTKDDET GKLVFAGVSA DKNVEVHQLT TKSGNKVVAT FWRHPFARFT LLYSHGNAAD LGQMVELFIE LRAHLRVNIM
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84JV3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.