CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032105.1-P	Field mustard	cytosol	88.1	75.51
CDY20301	Canola	cytosol	86.9	74.24
CDY20302	Canola	cytosol	73.41	70.08
CDY55247	Canola	cytosol	81.35	69.73
CDY34778	Canola	cytosol	80.16	68.71
AT2G24320.2	Thale cress	cytosol	74.6	64.16
CDY51485	Canola	cytosol	74.6	63.95
CDX68717	Canola	cytosol	74.21	63.61
CDY28238	Canola	cytosol	73.81	63.27
CDX72285	Canola	cytosol	73.41	62.93
CDY13406	Canola	cytosol	73.41	62.93
CDY23273	Canola	cytosol	73.02	62.59
KRH20089	Soybean	cytosol	68.65	59.04
CDY37504	Canola	cytosol	17.46	57.89
CDY31930	Canola	cytosol	14.68	57.81
HORVU6Hr1G085730.5	Barley	mitochondrion	57.14	57.37
PGSC0003DMT400008297	Potato	cytosol	66.27	56.61
GSMUA_Achr5P04500_001	Banana	cytosol	66.27	56.61
TraesCS6A01G360000.1	Wheat	cytosol	61.9	56.52
Solyc07g005130.2.1	Tomato	cytosol	65.87	56.27
TraesCS6D01G343000.1	Wheat	cytosol	61.9	56.12
VIT_11s0149g00410.t01	Wine grape	cytosol	46.03	56.04
KRH12940	Soybean	cytosol	65.87	55.89
TraesCS6B01G392900.1	Wheat	cytosol	61.51	55.76
GSMUA_Achr9P13240_001	Banana	cytosol	65.08	55.59
Os02t0796600-01	Rice	cytosol	57.54	54.92
GSMUA_Achr11P...	Banana	cytosol	64.29	54.92
GSMUA_Achr3P04580_001	Banana	cytosol	63.1	53.9
KXG31273	Sorghum	plastid	63.49	52.63
VIT_11s0206g00050.t01	Wine grape	cytosol	48.02	50.42
CDY37505	Canola	cytosol, extracellular	12.7	47.76
CDX85599	Canola	cytosol	45.24	43.68
CDX91066	Canola	plastid	55.95	42.99
CDY35552	Canola	plastid	57.14	41.26
CDY27016	Canola	plastid	55.56	40.94
CDY32850	Canola	cytosol	55.56	40.7
CDY51065	Canola	plastid	55.56	40.7
CDX69584	Canola	endoplasmic reticulum	57.94	39.46
CDY09851	Canola	plastid	57.94	39.46
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	55.95	39.06
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	55.95	39.06
CDX98113	Canola	plastid	55.56	38.46
CDY56180	Canola	plastid	54.76	38.02
CDX85290	Canola	cytosol, nucleus, plastid	57.54	37.96
CDX86348	Canola	cytosol, nucleus, plastid	57.54	37.96
CDX77081	Canola	plastid	31.75	37.91
CDY03421	Canola	cytosol	53.57	37.6
CDY35777	Canola	cytosol	55.95	37.4
CDY34308	Canola	cytosol	53.97	37.16
CDY12257	Canola	plastid	55.16	33.82
CDY22593	Canola	plastid	54.76	33.58
CDY11031	Canola	cytosol, plastid	31.75	33.47
CDY43012	Canola	plastid	57.14	33.41
CDX92650	Canola	cytosol	54.37	31.57
CDY53272	Canola	plastid	17.86	28.66
CDY45906	Canola	cytosol	24.6	27.8

Protein Annotations

EnsemblPlants:CDY46139	EnsemblPlantsGene:GSBRNA2T00083313001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:FSH_dom	InterPro:IPR029058
ncoils:Coil	PANTHER:PTHR12277	PANTHER:PTHR12277:SF45	PFAM:PF03959	ProteinID:CDY46139	ProteinID:CDY46139.1
SEG:seg	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI0004EE9759	UniProt:A0A078I9Y4	MapMan:35.2

Description

BnaA04g14270DBnaA04g14270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9Y4]

Coordinates

chrLK032651:-:80343..81561

Molecular Weight (calculated)

29051.9 Da

IEP (calculated)

10.567

GRAVY (calculated)

-0.590

Length

252 amino acids

Sequence
(BLAST)

001: MGNMTSNVAA KLAFFPPSPA TYGVNSLLFK KKKKKKKKKK KKKKKKKKKK KKILNLFFCY DYSGYGASTG KPSEVNTYHD IEAVYNCLRS EYGIKQEEMV
101: LYGQSVGSGP TLYLASRLKR LRGVVLHSAI LSGIRVLYPV KMTFWFDIYK NIERIRHVTC PVLVIHGTKD EVVNMSHGKR LWELSKDKYD PLWVKGGGHC
201: NLESYPEYIK HLRKFITAME KLALNNPPTK QADDEPSITK TKHHCCLRFR KK

Best Arabidopsis Sequence Match ( AT2G24320.1 )
(BLAST)

001: MAAKFAFFPP PPTYDVGKDE ETGKLMFTGI TPEKSMDVHQ LTTKSGNKVI ATFWKHPFSR FTLLYSHGNA ADLGQMVDLF IELRAHLRVN IMSYDYSGYG
101: ASTGKPTELN TYYDIEAVYN CLRTEYGIMQ EEMILYGQSV GSGPTLHLAS RVKRLRGIVL HSAILSGLRV LYPVKMTFWF DMYKNIDKIR HVTCPVLVIH
201: GTKDDIVNMS HGKRLWELAK DKYDPLWVKG GGHCNLETYP EYIKHMRKFM NAMEKLALNN PPNKQQNDEP SIKETKQNRC LRFSKR

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT2G24320]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.