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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025415.1-P Field mustard cytosol, nucleus, plastid 97.38 97.64
CDX85290 Canola cytosol, nucleus, plastid 96.86 96.86
CDY35777 Canola cytosol 91.1 92.31
AT3G30380.1 Thale cress cytosol 89.79 85.96
CDY45906 Canola cytosol 46.34 79.37
Solyc02g065700.2.1 Tomato cytosol 53.14 72.24
KRG93729 Soybean cytosol 71.47 72.22
PGSC0003DMT400003495 Potato plastid 70.42 71.35
KRH18325 Soybean cytosol, nucleus, peroxisome 70.42 71.16
Solyc02g089320.2.1 Tomato plastid 66.75 71.03
KRH01428 Soybean plastid 69.9 70.26
PGSC0003DMT400068320 Potato cytosol 51.57 70.11
KRH45145 Soybean plastid 68.85 68.85
GSMUA_Achr9P22720_001 Banana plastid 18.06 67.65
CDY31930 Canola cytosol 11.26 67.19
OQU76743 Sorghum cytosol, mitochondrion 55.24 66.77
GSMUA_Achr10P... Banana plastid 60.73 65.54
CDY20302 Canola cytosol 44.76 64.77
CDY37504 Canola cytosol 12.83 64.47
TraesCS7B01G293000.1 Wheat plastid 64.14 63.97
TraesCS7A01G391300.1 Wheat plastid 64.14 63.97
PGSC0003DMT400068318 Potato plastid 18.85 63.72
TraesCS7D01G386800.1 Wheat plastid 63.87 63.71
CDX91066 Canola plastid 53.93 62.8
CDY37505 Canola cytosol, extracellular 10.99 62.69
CDY28238 Canola cytosol 48.17 62.59
CDY55247 Canola cytosol 48.17 62.59
CDX68717 Canola cytosol 48.17 62.59
GSMUA_Achr3P28090_001 Banana cytosol, nucleus, plastid 62.83 62.34
CDX72285 Canola cytosol 47.91 62.24
CDY51485 Canola cytosol 47.64 61.9
CDY13406 Canola cytosol 47.64 61.9
CDY34778 Canola cytosol 47.38 61.56
CDY03421 Canola cytosol 57.85 61.56
CDY20301 Canola cytosol 47.38 61.36
CDY23273 Canola cytosol 47.12 61.22
Os02t0190800-01 Rice plasma membrane 62.3 61.18
CDY34308 Canola cytosol 58.12 60.66
CDY09851 Canola plastid 58.38 60.27
CDX69584 Canola endoplasmic reticulum 58.38 60.27
CDY32850 Canola cytosol 54.19 60.17
TraesCS6B01G199000.1 Wheat plastid 62.04 60.15
TraesCS6A01G170900.1 Wheat plastid 62.3 60.1
TraesCS6D01G160600.1 Wheat plastid 61.78 59.9
EES06425 Sorghum plastid 63.87 59.66
HORVU6Hr1G034870.2 Barley plastid 62.04 59.4
VIT_14s0083g00800.t01 Wine grape plastid 68.32 59.32
HORVU7Hr1G092460.1 Barley plastid 64.14 59.04
CDY28668 Canola cytosol, endoplasmic reticulum, nucleus, plastid 55.76 59.0
CDY28862 Canola cytosol, endoplasmic reticulum, nucleus, plastid 55.76 59.0
CDY27016 Canola plastid 52.62 58.77
CDY51065 Canola plastid 52.36 58.14
CDY46139 Canola cytosol 37.96 57.54
CDX85599 Canola cytosol 39.27 57.47
Zm00001d015656_P001 Maize plastid 64.14 56.71
CDX98113 Canola plastid 53.93 56.59
Zm00001d046660_P001 Maize plastid 62.04 56.29
CDY56180 Canola plastid 53.4 56.2
CDX77081 Canola plastid 30.89 55.92
Zm00001d053705_P001 Maize cytosol 30.1 53.24
TraesCS7D01G284300.3 Wheat cytosol 56.81 52.93
CDY11031 Canola cytosol, plastid 32.98 52.72
TraesCS7B01G196600.1 Wheat cytosol 56.54 52.68
CDX92650 Canola cytosol 59.16 52.07
KXG25721 Sorghum cytosol 54.97 50.97
Zm00001d052810_P001 Maize cytosol 55.5 50.72
HORVU7Hr1G061990.5 Barley cytosol, nucleus, plastid 58.9 50.34
CDY35552 Canola plastid 44.24 48.42
Zm00001d012172_P001 Maize mitochondrion 28.01 45.73
CDY12257 Canola plastid 43.98 40.88
CDY22593 Canola plastid 43.98 40.88
CDY53272 Canola plastid 16.23 39.49
CDY43012 Canola plastid 44.5 39.44
Protein Annotations
EnsemblPlants:CDX86348EnsemblPlantsGene:GSBRNA2T00144473001Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:AB_hydrolase_1InterPro:IPR029058
PANTHER:PTHR12277PANTHER:PTHR12277:SF124PFAM:PF00561ProteinID:CDX86348ProteinID:CDX86348.1SEG:seg
SUPFAM:SSF53474UniParc:UPI0004EE3420MapMan:35.2:::
Description
BnaA06g30650D
Coordinates
chrLK031845:-:1067364..1069348
Molecular Weight (calculated)
42719.9 Da
IEP (calculated)
9.482
GRAVY (calculated)
-0.540
Length
382 amino acids
Sequence
(BLAST)
001: MGAVTSSMAA KFAFFPPNPP SYGVEVAEET GKLRLTGVEN VKENVEVLKL KTKRGNQVFA AYIKNPKASI TLLYSHGNAA DLGQMFELFS ELSLHLRVNL
101: IGYDYSGYGR SSGKPSEQNT YHDIEAVYRC LEEKYGVKEQ DVILYGQSVG SGPTLELASR LPNLRAVVLH SAIASGLRVM YPVKRTYWFD IYKNIDKISL
201: VKCPVLVVHG TSDDVVNWSH GKQLFDLCKE KYEPLWIKGG NHCDLELYPQ YIKHLKKFVS AVEKSPHIQS GTVPQTEKAR SSTDVRESSR PSIDQREKSR
301: TSTDQREMPK LSSTESKDIA RASVDKRERT RKSVDGSEKP SNATEQQIQP EKGRKSIDRF GGMIRSVGLC NIDCFKPTAT AK
Best Arabidopsis Sequence Match ( AT3G30380.2 )
(BLAST)
001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.