Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g065700.2.1 | Tomato | cytosol | 96.8 | 96.8 |
| PGSC0003DMT400068318 | Potato | plastid | 38.08 | 94.69 |
| GSMUA_Achr9P22720_001 | Banana | plastid | 24.56 | 67.65 |
| PGSC0003DMT400003495 | Potato | plastid | 83.27 | 62.07 |
| PGSC0003DMT400067845 | Potato | cytosol, plastid | 68.33 | 56.64 |
| PGSC0003DMT400008297 | Potato | cytosol | 59.07 | 56.27 |
| KRG93729 | Soybean | cytosol | 74.02 | 55.03 |
| Bra020738.1-P | Field mustard | cytosol, nucleus, plastid | 68.68 | 54.52 |
| KRH18325 | Soybean | cytosol, nucleus, peroxisome | 73.31 | 54.5 |
| KRH01428 | Soybean | plastid | 73.67 | 54.47 |
| PGSC0003DMT400006272 | Potato | plastid | 65.84 | 54.25 |
| GSMUA_Achr10P... | Banana | plastid | 68.33 | 54.24 |
| KRH45145 | Soybean | plastid | 73.67 | 54.19 |
| PGSC0003DMT400017818 | Potato | cytosol | 71.17 | 53.91 |
| PGSC0003DMT400039199 | Potato | cytosol | 69.75 | 52.83 |
| Bra025415.1-P | Field mustard | cytosol, nucleus, plastid | 70.11 | 51.71 |
| OQU76743 | Sorghum | cytosol, mitochondrion | 58.01 | 51.58 |
| CDX85290 | Canola | cytosol, nucleus, plastid | 70.11 | 51.57 |
| CDX86348 | Canola | cytosol, nucleus, plastid | 70.11 | 51.57 |
| CDY35777 | Canola | cytosol | 68.33 | 50.93 |
| GSMUA_Achr3P28090_001 | Banana | cytosol, nucleus, plastid | 69.39 | 50.65 |
| TraesCS7D01G386800.1 | Wheat | plastid | 68.33 | 50.13 |
| TraesCS7B01G293000.1 | Wheat | plastid | 68.33 | 50.13 |
| TraesCS7A01G391300.1 | Wheat | plastid | 67.97 | 49.87 |
| Os02t0190800-01 | Rice | plasma membrane | 68.33 | 49.36 |
| AT3G30380.1 | Thale cress | cytosol | 68.68 | 48.37 |
| TraesCS6A01G170900.1 | Wheat | plastid | 67.97 | 48.23 |
| TraesCS6B01G199000.1 | Wheat | plastid | 67.26 | 47.97 |
| TraesCS6D01G160600.1 | Wheat | plastid | 67.26 | 47.97 |
| HORVU6Hr1G034870.2 | Barley | plastid | 67.62 | 47.62 |
| VIT_14s0083g00800.t01 | Wine grape | plastid | 73.67 | 47.05 |
| PGSC0003DMT400062645 | Potato | mitochondrion | 65.84 | 46.72 |
| EES06425 | Sorghum | plastid | 67.97 | 46.7 |
| HORVU7Hr1G092460.1 | Barley | plastid | 67.97 | 46.02 |
| Zm00001d046660_P001 | Maize | plastid | 68.33 | 45.61 |
| Zm00001d015656_P001 | Maize | plastid | 68.33 | 44.44 |
| KXG25721 | Sorghum | cytosol | 64.41 | 43.93 |
| TraesCS7B01G196600.1 | Wheat | cytosol | 63.35 | 43.41 |
| TraesCS7D01G284300.3 | Wheat | cytosol | 63.35 | 43.41 |
| PGSC0003DMT400050553 | Potato | cytosol | 57.3 | 43.4 |
| Zm00001d012172_P001 | Maize | mitochondrion | 35.59 | 42.73 |
| Zm00001d052810_P001 | Maize | cytosol | 62.63 | 42.11 |
| HORVU7Hr1G061990.5 | Barley | cytosol, nucleus, plastid | 63.7 | 40.04 |
| PGSC0003DMT400006166 | Potato | plasma membrane, plastid | 54.45 | 39.23 |
| Zm00001d053705_P001 | Maize | cytosol | 23.84 | 31.02 |
| CDY45906 | Canola | cytosol | 24.56 | 30.94 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400068320 | EnsemblPlantsGene:PGSC0003DMG402026561 | EntrezGene:102598142 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 |
| InterPro:IPR029058 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF124 | PFAM:PF12146 | PGSC:PGSC0003DMG402026561 | RefSeq:XP_006365652.1 |
| SEG:seg | SUPFAM:SSF53474 | UniParc:UPI000295B6CE | UniProt:M1CIU7 | MapMan:35.2 | : |
Description
Protein bem46 [Source:PGSC_GENE;Acc:PGSC0003DMG402026561]
Coordinates
chr2:-:24919207..24922443
Molecular Weight (calculated)
31253.5 Da
IEP (calculated)
5.576
GRAVY (calculated)
-0.223
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAVTSSMAS KFAFFPPNPP SYGVVMEEST GKIKMTEVVQ GQDVDILKLE TKKGTEIIAM YVRNPAAKLT VLYSHGNAAD LGQMYDLFTE LSLHLRVNLM
101: GYDYSGYGQS TGKPSEQNTY ADIEAAYKCL EETYGVKEED IILYGQSVGS GPTVDMGSRL SRLRGLVLHS PILSGVRVLH PVKRTYWFDI FKNIDKIPLV
201: ECPVLIIHGT ADDVVDCSHG KQLFDLCKQK YDPLWVEGGN HCDLELYPEY IKHLKKFISA IEKSTVSTNG HAQSMDQIDE P
101: GYDYSGYGQS TGKPSEQNTY ADIEAAYKCL EETYGVKEED IILYGQSVGS GPTVDMGSRL SRLRGLVLHS PILSGVRVLH PVKRTYWFDI FKNIDKIPLV
201: ECPVLIIHGT ADDVVDCSHG KQLFDLCKQK YDPLWVEGGN HCDLELYPEY IKHLKKFISA IEKSTVSTNG HAQSMDQIDE P
001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9S7U7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.