CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G391300.1	Wheat	plastid	91.46	75.46
TraesCS7B01G293000.1	Wheat	plastid	91.14	75.2
TraesCS7D01G386800.1	Wheat	plastid	90.82	74.93
Zm00001d046660_P001	Maize	plastid	96.2	72.21
HORVU7Hr1G092460.1	Barley	plastid	90.82	69.16
EES06425	Sorghum	plastid	86.39	66.75
GSMUA_Achr10P...	Banana	plastid	68.04	60.73
Bra019712.1-P	Field mustard	cytosol	50.32	59.33
KRG93729	Soybean	cytosol	70.89	59.26
KRH18325	Soybean	cytosol, nucleus, peroxisome	70.57	58.99
Solyc02g065700.2.1	Tomato	cytosol	51.9	58.36
PGSC0003DMT400068320	Potato	cytosol	51.58	58.01
PGSC0003DMT400003495	Potato	plastid	68.67	57.56
Solyc02g089320.2.1	Tomato	plastid	64.87	57.1
KRH01428	Soybean	plastid	67.72	56.32
VIT_01s0010g00670.t01	Wine grape	plastid	66.77	55.53
CDX85290	Canola	cytosol, nucleus, plastid	67.09	55.5
KRH45145	Soybean	plastid	67.09	55.5
CDX86348	Canola	cytosol, nucleus, plastid	66.77	55.24
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	66.46	55.12
CDY35777	Canola	cytosol	64.87	54.38
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	60.44	53.95
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	61.39	52.86
AT3G30380.1	Thale cress	cytosol	64.87	51.38
CDX98113	Canola	plastid	59.18	51.37
KXG31273	Sorghum	plastid	49.05	50.99
AT1G13610.1	Thale cress	plastid	57.59	50.84
CDY56180	Canola	plastid	58.23	50.69
CDY45906	Canola	cytosol	35.44	50.22
Solyc05g010680.1.1	Tomato	cytosol	59.81	49.35
VIT_14s0083g00800.t01	Wine grape	plastid	67.41	48.41
PGSC0003DMT400050553	Potato	cytosol	56.65	48.25
EES01292	Sorghum	plastid	55.7	47.57
KXG25721	Sorghum	cytosol	60.76	46.6
EES14598	Sorghum	plastid	49.05	42.35
PGSC0003DMT400068318	Potato	plastid	12.34	34.51
Bra040729.1-P	Field mustard	plastid	9.81	27.43

Protein Annotations

EnsemblPlants:OQU76743	EnsemblPlantsGene:SORBI_3010G199300	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR12277	PANTHER:PTHR12277:SF70	PFAM:PF12146	ProteinID:OQU76743	ProteinID:OQU76743.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0009DC8CD0	UniProt:A0A1W0VTX8	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr10:+:54241359..54245613

Molecular Weight (calculated)

35434.9 Da

IEP (calculated)

8.124

GRAVY (calculated)

-0.589

Length

316 amino acids

Sequence
(BLAST)

001: MYVRQPGARL TLLYSHGNAA DLGQMYELFV ELSAHLNVNL MGYDYSGYGQ SSGKPSEQNT YADIEAVYRC LIETYGASEE NIILYGQSVG SGPTLDLASR
101: LPHLRAVVLH SPISSGLRVM YPVKHTYWFD IYKNIDKIPL VKCPVLVIHG TADEVVDCSH GRALWELSKV KYEPLWVKGG NHCNLELYPE YIKHLKKFVN
201: AIERSPPVKD ESPESSGPSD PSETGSESAE SSRRSTDIRE KPRSSIDHRP SIDRREKPRG SIDRRDKSRK SVDQLDKPRA SVDQPDRPRK SIDRFGGMMR
301: SVKLCNIDCF TAASGS

Best Arabidopsis Sequence Match ( AT3G30380.2 )
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.