Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P22720_001 | Banana | plastid | 61.06 | 67.65 |
| PGSC0003DMT400068320 | Potato | cytosol | 94.69 | 38.08 |
| Solyc02g065700.2.1 | Tomato | cytosol | 90.27 | 36.3 |
| PGSC0003DMT400003495 | Potato | plastid | 77.88 | 23.34 |
| PGSC0003DMT400067845 | Potato | cytosol, plastid | 61.06 | 20.35 |
| PGSC0003DMT400006272 | Potato | plastid | 61.06 | 20.23 |
| Bra020738.1-P | Field mustard | cytosol, nucleus, plastid | 62.83 | 20.06 |
| KRH01428 | Soybean | plastid | 67.26 | 20.0 |
| KRH45145 | Soybean | plastid | 66.37 | 19.63 |
| KRG93729 | Soybean | cytosol | 64.6 | 19.31 |
| GSMUA_Achr10P... | Banana | plastid | 60.18 | 19.21 |
| CDX85290 | Canola | cytosol, nucleus, plastid | 64.6 | 19.11 |
| KRH18325 | Soybean | cytosol, nucleus, peroxisome | 63.72 | 19.05 |
| Bra025415.1-P | Field mustard | cytosol, nucleus, plastid | 63.72 | 18.9 |
| CDX86348 | Canola | cytosol, nucleus, plastid | 63.72 | 18.85 |
| PGSC0003DMT400008297 | Potato | cytosol | 48.67 | 18.64 |
| PGSC0003DMT400017818 | Potato | cytosol | 61.06 | 18.6 |
| CDY35777 | Canola | cytosol | 61.95 | 18.57 |
| GSMUA_Achr3P28090_001 | Banana | cytosol, nucleus, plastid | 62.83 | 18.44 |
| AT3G30380.1 | Thale cress | cytosol | 62.83 | 17.79 |
| PGSC0003DMT400039199 | Potato | cytosol | 58.41 | 17.79 |
| TraesCS7B01G293000.1 | Wheat | plastid | 59.29 | 17.49 |
| PGSC0003DMT400062645 | Potato | mitochondrion | 61.06 | 17.42 |
| TraesCS7D01G386800.1 | Wheat | plastid | 58.41 | 17.23 |
| TraesCS7A01G391300.1 | Wheat | plastid | 58.41 | 17.23 |
| VIT_14s0083g00800.t01 | Wine grape | plastid | 66.37 | 17.05 |
| Os02t0190800-01 | Rice | plasma membrane | 58.41 | 16.97 |
| TraesCS6A01G170900.1 | Wheat | plastid | 58.41 | 16.67 |
| EES06425 | Sorghum | plastid | 60.18 | 16.63 |
| TraesCS6D01G160600.1 | Wheat | plastid | 57.52 | 16.5 |
| TraesCS7B01G196600.1 | Wheat | cytosol | 59.29 | 16.34 |
| HORVU6Hr1G034870.2 | Barley | plastid | 57.52 | 16.29 |
| TraesCS6B01G199000.1 | Wheat | plastid | 56.64 | 16.24 |
| HORVU7Hr1G092460.1 | Barley | plastid | 59.29 | 16.14 |
| TraesCS7D01G284300.3 | Wheat | cytosol | 58.41 | 16.1 |
| KXG25721 | Sorghum | cytosol | 58.41 | 16.02 |
| Zm00001d046660_P001 | Maize | plastid | 59.29 | 15.91 |
| Zm00001d015656_P001 | Maize | plastid | 60.18 | 15.74 |
| Zm00001d052810_P001 | Maize | cytosol | 56.64 | 15.31 |
| PGSC0003DMT400006166 | Potato | plasma membrane, plastid | 52.21 | 15.13 |
| HORVU7Hr1G061990.5 | Barley | cytosol, nucleus, plastid | 59.29 | 14.99 |
| PGSC0003DMT400050553 | Potato | cytosol | 48.67 | 14.82 |
| OQU76743 | Sorghum | cytosol, mitochondrion | 34.51 | 12.34 |
| Zm00001d012172_P001 | Maize | mitochondrion | 12.39 | 5.98 |
| Zm00001d053705_P001 | Maize | cytosol | 2.65 | 1.39 |
| CDY45906 | Canola | cytosol | 1.77 | 0.9 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400068318 | EnsemblPlantsGene:PGSC0003DMG401026561 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF124 | PGSC:PGSC0003DMG401026561 | UniParc:UPI0002957EEC |
| UniProt:M1CIU5 | MapMan:35.2 | : | : | : | : |
Description
Protein bem46 [Source:PGSC_GENE;Acc:PGSC0003DMG401026561]
Coordinates
chr2:-:24921508..24922442
Molecular Weight (calculated)
12421.2 Da
IEP (calculated)
5.668
GRAVY (calculated)
0.058
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAVTSSMAS KFAFFPPNPP SYGVVMEEST GKIKMTEVVQ GQDVDILKLE TKKGTEIIAM YVRNPAAKLT VLYSHGNAAD LGQMYDLFTE LSLHLRVNLM
101: GYSSLCNIEI QNI
101: GYSSLCNIEI QNI
001: MGGVTSSMAA KLAFFPPNPP SYKLVRDETT ELFLMSPFPH RENVDILRLP TRRGTEIVAM YIRYPMAVTT LLYSHGNAAD IGQMYELFIE LSIHLRVNLM
101: GYDYSGYGQS SGKPTEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKITLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGC EQPPRHSVDA PRKSKDGREK
301: PRKSIDRLRF QGYKLSHIEK PEKLKVPFEE MERSRRSVDI YRDKSQPMER ARKSVDWLDR SRATE
101: GYDYSGYGQS SGKPTEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKITLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGC EQPPRHSVDA PRKSKDGREK
301: PRKSIDRLRF QGYKLSHIEK PEKLKVPFEE MERSRRSVDI YRDKSQPMER ARKSVDWLDR SRATE
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB70]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.