Factsheet for Os02t0190800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06425	Sorghum	plastid	86.38	82.15
Zm00001d015656_P001	Maize	plastid	86.63	78.01
Solyc02g065700.2.1	Tomato	cytosol	49.87	69.04
PGSC0003DMT400068320	Potato	cytosol	49.36	68.33
GSMUA_Achr10P...	Banana	plastid	60.41	66.38
Solyc02g089320.2.1	Tomato	plastid	60.15	65.18
KRH18325	Soybean	cytosol, nucleus, peroxisome	62.98	64.81
KRG93729	Soybean	cytosol	62.72	64.55
PGSC0003DMT400003495	Potato	plastid	62.47	64.46
Os02t0796600-01	Rice	cytosol	43.7	64.39
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	57.84	63.56
CDX85290	Canola	cytosol, nucleus, plastid	62.21	63.35
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	61.95	63.25
KRH01428	Soybean	plastid	61.44	62.89
VIT_01s0010g00670.t01	Wine grape	plastid	60.93	62.37
CDY35777	Canola	cytosol	60.41	62.33
CDX86348	Canola	cytosol, nucleus, plastid	61.18	62.3
KRH45145	Soybean	plastid	60.67	61.78
Os12t0286600-01	Rice	cytosol, plastid	59.13	61.01
PGSC0003DMT400068318	Potato	plastid	16.97	58.41
AT3G30380.1	Thale cress	cytosol	59.64	58.15
Bra019712.1-P	Field mustard	cytosol	39.85	57.84
CDX98113	Canola	plastid	53.47	57.14
AT1G13610.1	Thale cress	plastid	51.93	56.42
Os01t0689800-01	Rice	plastid	52.7	56.32
CDY56180	Canola	plastid	52.44	56.2
Os08t0487900-01	Rice	cytosol	59.13	55.56
VIT_14s0083g00800.t01	Wine grape	plastid	60.67	53.64
PGSC0003DMT400050553	Potato	cytosol	50.64	53.1
Solyc05g010680.1.1	Tomato	cytosol	51.67	52.48
Bra040729.1-P	Field mustard	plastid	14.4	49.56
CDY45906	Canola	cytosol	27.76	48.43
Os08t0161500-01	Rice	plasma membrane	46.27	46.27
Os08t0487800-01	Rice	plastid	1.54	0.76

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	EntrezGene:4328574	InterPro:AB_hydrolase	EMBL:AK099853	ProteinID:BAD16480.1
ProteinID:BAF08067.1	ProteinID:BAS77398.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008236	GO:GO:0016787	GO:GO:0019538	InterPro:Hydrolase_4
InterPro:IPR029058	EnsemblPlantsGene:Os02g0190800	EnsemblPlants:Os02t0190800-01	PFAM:PF12146	PANTHER:PTHR12277	PANTHER:PTHR12277:SF70
UniProt:Q6YUU0	SUPFAM:SSF53474	UniParc:UPI0000358D59	RefSeq:XP_015627217.1	RefSeq:XP_015627218.1	SEG:seg

Description

Alpha/beta hydrolase fold-1 domain containing protein. (Os02t0190800-01)

Coordinates

chr2:-:5039000..5043307

Molecular Weight (calculated)

42817.6 Da

IEP (calculated)

8.522

GRAVY (calculated)

-0.525

Length

389 amino acids

Sequence
(BLAST)

001: MGAVTSTVAA RFAFFPPSPP SYGAEAPPPP AAAGAGVGVE KDGGGGGVVV ELTDVPRRGN VEARRLRTKR GTEVVAMYVR QAGARLTLLY SHGNAADLGQ
101: MFELFVELSA HLNVNLMGYD YSGYGQSSGK PSEHNTYADI EAVYRCLVET YGASEENIIL YGQSVGSGPT LDLASRLPHL RAVVLHSPIL SGLRVMYPVK
201: HTYWFDIYKN IDKIPLVRCP VLVIHGTADE VVDCSHGRAL WELSKVKYEP LWVKGGNHCN LELYPEYIKH LKKFVGAIEK SPPLYDESPE SSGPSDNTQT
301: NPEGTEESRK STDCREKTRP SIDHRQSTDR RDKSRGSTDR RDKNRKSVDQ PRASVDQPDR PRKSVDRFGG VMKSVRYIDC FRVTTASGS

Best Arabidopsis Sequence Match ( AT3G30380.2 )
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.