Factsheet for Os08t0487800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

plastid: 17189339
mitochondrion: 19010998
nucleus: 24133045
extracellular: 26072143
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

msms PMID: 24133045 doi

DK Jaiswal, D Ray, MK Choudhary, P Subba, A Kumar, J Verma, R Kumar, A Datta, S Chakraborty, N Chakraborty

National Institute of Plant Genome Research, New Delhi, India.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0487900-01	Rice	cytosol	2.04	3.86
Os02t0190800-01	Rice	plasma membrane	0.76	1.54
Os01t0689800-01	Rice	plastid	0.64	1.37
Os08t0161500-01	Rice	plasma membrane	0.51	1.03
Os12t0286600-01	Rice	cytosol, plastid	0.38	0.8
Os02t0796600-01	Rice	cytosol	0.13	0.38

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
EntrezGene:4345893	ProteinID:BAD09415.1	ProteinID:BAF24017.1	ProteinID:BAT05997.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C
InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196	HAMAP:MF_00505
EnsemblPlantsGene:Os08g0487800	EnsemblPlants:Os08t0487800-01	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775
ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF41	UniProt:Q6ZCV7	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387
SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI000023ADF6	RefSeq:XP_015650272.1	RefSeq:XP_015650273.1
SEG:seg	:	:	:	:	:

Description

Similar to Heat-shock protein precursor. (Os08t0487800-01)

Coordinates

chr8:-:24124862..24129488

Molecular Weight (calculated)

88352.4 Da

IEP (calculated)

4.730

GRAVY (calculated)

-0.530

Length

785 amino acids

Sequence
(BLAST)

001: MAPSLSRSLG ASSVAALRPC AGRVRAPGAG AARGSGSARC GRGVRWEAGS GSRGRLVRVR CDAAVAEKAE ETAEEEKFEY QAEVSRLMDL IVHSLYSHKE
101: VFLRELVSNA SDALDKLRFL GVTDSSLLAD GGELEIRIKP DPDAGTITIT DTGIGMTKDE LKDCLGTIAQ SGTSKFLKAL KENKDLGADN GLIGQFGVGF
201: YSAFLVAEKV VVSTKSPKSD KQYVWEGVAD SSSYVIKEET DPEKMLTRGT QITLVLRPDD KFEFADPGRI QGLVKNYSQF VSFPIYTWQE KSRTVEVEED
301: EEAKEGEEAK EGEQKKKKTI TEKYWDWELA NETKPIWMRS PKEIEKTEYN EFYKKAFNEF LDPLAYTHFT TEGEVEFRSV LYIPGMAPLS NEEIMNPKTK
401: NIRLYVKRVF ISDDFDGELF PRYLSFVKGV VDSNDLPLNV SREILQESRI VRIMRKRLVR KTFDMIEEIS EKDDKEDYKK FWESFGKFIK LGCIEDTGNH
501: KRLAPLLRFH TSKNEGDLIS LDQYVENMPE NQKAIYYIAT DSLQSAKTAP FLEKLVQKDI EVLYLIEPID EVAIQNLQTY KEKKFVDISK EDLELGDEDE
601: DNKESKQEYT LLCDWVKQQL GDKVAKVQIS KRLSLSPCVL VSGKFGWSAN MERLMKAQTL GDTSSLEFMR GRRIFEINPD HPIVKDLNAA CKNEPESTEA
701: KRAVELLYET ALISSGYTPD SPAELGGKIY EMMTIALGGR WGRSDTETEA ATTGDASTET GSSEATVTEV IEPSEVRPES DPWRD

Best Arabidopsis Sequence Match ( AT2G04030.1 )
(BLAST)

001: MAPALSRSLY TSPLTSVPIT PVSSRLSHLR SSFLPHGGAL RTGVSCSWNL EKRCNRFAVK CDAAVAEKET TEEGSGEKFE YQAEVSRLLD LIVHSLYSHK
101: EVFLRELVSN ASDALDKLRF LSVTEPSLLG DGGDLEIRIK PDPDNGTITI TDTGIGMTKE ELIDCLGTIA QSGTSKFLKA LKENKDLGAD NGLIGQFGVG
201: FYSAFLVAEK VVVSTKSPKS DKQYVWESVA DSSSYLIREE TDPDNILRRG TQITLYLRED DKYEFAESTR IKNLVKNYSQ FVGFPIYTWQ EKSRTIEVEE
301: DEPVKEGEEG EPKKKKTTKT EKYWDWELAN ETKPLWMRNS KEVEKGEYNE FYKKAFNEFL DPLAHTHFTT EGEVEFRSIL YIPGMGPLNN EDVTNPKTKN
401: IRLYVKRVFI SDDFDGELFP RYLSFVKGVV DSDDLPLNVS REILQESRIV RIMRKRLIRK TFDMIQEISE SENKEDYKKF WENFGRFLKL GCIEDTGNHK
501: RITPLLRFFS SKNEEELTSL DDYIENMGEN QKAIYYLATD SLKSAKSAPF LEKLIQKDIE VLYLVEPIDE VAIQNLQTYK EKKFVDISKE DLELGDEDEV
601: KDREAKQEFN LLCDWIKQQL GDKVAKVQVS NRLSSSPCVL VSGKFGWSAN MERLMKAQAL GDTSSLEFMR GRRILEINPD HPIIKDLNAA CKNAPESTEA
701: TRVVDLLYDT AIISSGFTPD SPAELGNKIY EMMAMAVGGR WGRVEEEEES STVNEGDDKS GETEVVEPSE VRAESDPWQD

Arabidopsis Description

HSP90-5HSP90.5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPV7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.