Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019712.1-P | Field mustard | cytosol | 60.06 | 80.22 |
| CDX98113 | Canola | plastid | 81.56 | 80.22 |
| CDY56180 | Canola | plastid | 80.73 | 79.61 |
| Bra040729.1-P | Field mustard | plastid | 22.63 | 71.68 |
| VIT_01s0010g00670.t01 | Wine grape | plastid | 66.76 | 62.89 |
| GSMUA_Achr9P22720_001 | Banana | plastid | 16.76 | 58.82 |
| OQU76743 | Sorghum | cytosol, mitochondrion | 50.84 | 57.59 |
| AT1G66900.1 | Thale cress | cytosol | 43.58 | 57.35 |
| GSMUA_Achr10P... | Banana | plastid | 56.42 | 57.06 |
| TraesCS7D01G386800.1 | Wheat | plastid | 58.66 | 54.83 |
| AT2G24320.2 | Thale cress | cytosol | 44.69 | 54.61 |
| TraesCS7A01G391300.1 | Wheat | plastid | 58.38 | 54.57 |
| TraesCS7B01G293000.1 | Wheat | plastid | 58.38 | 54.57 |
| AT3G01690.1 | Thale cress | cytosol, plastid | 54.75 | 54.29 |
| GSMUA_Achr3P28090_001 | Banana | cytosol, nucleus, plastid | 58.38 | 54.29 |
| AT4G31020.2 | Thale cress | cytosol | 44.13 | 53.74 |
| AT4G24760.1 | Thale cress | cytosol, nucleus, plastid | 53.35 | 52.33 |
| TraesCS6A01G170900.1 | Wheat | plastid | 57.54 | 52.02 |
| Os02t0190800-01 | Rice | plasma membrane | 56.42 | 51.93 |
| TraesCS6D01G160600.1 | Wheat | plastid | 56.98 | 51.78 |
| TraesCS6B01G199000.1 | Wheat | plastid | 56.98 | 51.78 |
| HORVU6Hr1G034870.2 | Barley | plastid | 57.26 | 51.38 |
| AT5G14390.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 52.79 | 51.22 |
| AT3G30380.1 | Thale cress | cytosol | 56.98 | 51.13 |
| AT5G38220.1 | Thale cress | cytosol | 47.77 | 50.89 |
| EES06425 | Sorghum | plastid | 57.82 | 50.61 |
| HORVU7Hr1G092460.1 | Barley | plastid | 58.66 | 50.6 |
| Zm00001d046660_P001 | Maize | plastid | 58.1 | 49.41 |
| Zm00001d015656_P001 | Maize | plastid | 57.82 | 47.92 |
| Solyc05g010680.1.1 | Tomato | cytosol | 49.44 | 46.21 |
| KXG25721 | Sorghum | cytosol | 53.07 | 46.12 |
| PGSC0003DMT400050553 | Potato | cytosol | 47.49 | 45.82 |
| Zm00001d052810_P001 | Maize | cytosol | 52.23 | 44.74 |
| TraesCS7B01G196600.1 | Wheat | cytosol | 51.12 | 44.63 |
| TraesCS7D01G284300.3 | Wheat | cytosol | 51.12 | 44.63 |
| Zm00001d012172_P001 | Maize | mitochondrion | 27.93 | 42.73 |
| HORVU7Hr1G061990.5 | Barley | cytosol, nucleus, plastid | 52.23 | 41.83 |
| Zm00001d053705_P001 | Maize | cytosol | 24.86 | 41.2 |
| AT1G32190.1 | Thale cress | plastid | 43.58 | 36.97 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:837922 | UniProt:A0A178W816 | ProteinID:AAF99827.1 | InterPro:AB_hydrolase |
| ProteinID:AEE29046.1 | ArrayExpress:AT1G13610 | EnsemblPlantsGene:AT1G13610 | RefSeq:AT1G13610 | TAIR:AT1G13610 | RefSeq:AT1G13610-TAIR-G |
| EnsemblPlants:AT1G13610.1 | TAIR:AT1G13610.1 | EMBL:AY924668 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:Hydrolase_4 | InterPro:IPR029058 | RefSeq:NP_172818.2 | ProteinID:OAP14286.1 | PFAM:PF12146 | PO:PO:0009005 |
| PO:PO:0020030 | PO:PO:0020100 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF77 | UniProt:Q9FZ68 | MEROPS:S09.A23 |
| SUPFAM:SSF53474 | UniParc:UPI00000A3DAE | SEG:seg | : | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ68]
Coordinates
chr1:-:4663831..4666130
Molecular Weight (calculated)
40406.6 Da
IEP (calculated)
9.537
GRAVY (calculated)
-0.372
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIATSTMAA KLAFFPPNPP SYTVVTEEST GKMMISTNLP HYLRDENIEV VKIRTKRGNE IVAMYVKNPT AKLTVLFSHG NASDLAQIFY ILAELIQLNV
101: NLMGYDYSGY GQSSGKPSEQ DTYADIEAAY NWLRQTYGTK DERIILYGQS VGSGPSLELA SRLPRLRALV LHSPFLSGLR VMYPVKHSFP FDIYKNIDKI
201: HLVECPVLVI HGTDDDVVNI SHGKHLWGLC KEKYEPLWLK GRGHSDIEMS PEYLPHLRKF ISAIEKLPVP KFRRQSLAND HKNDKSTKSS WIGSRHSIEC
301: VPPRDKSRKI SIDHRFGKPR NSVGSSDRAR NSFDRLGEMV RSVRLCNVDC VKNAVAEV
101: NLMGYDYSGY GQSSGKPSEQ DTYADIEAAY NWLRQTYGTK DERIILYGQS VGSGPSLELA SRLPRLRALV LHSPFLSGLR VMYPVKHSFP FDIYKNIDKI
201: HLVECPVLVI HGTDDDVVNI SHGKHLWGLC KEKYEPLWLK GRGHSDIEMS PEYLPHLRKF ISAIEKLPVP KFRRQSLAND HKNDKSTKSS WIGSRHSIEC
301: VPPRDKSRKI SIDHRFGKPR NSVGSSDRAR NSFDRLGEMV RSVRLCNVDC VKNAVAEV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.