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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55247 Canola cytosol 86.01 85.71
CDY34778 Canola cytosol 85.67 85.37
Bra007861.1-P Field mustard cytosol 85.67 85.37
Bra032105.1-P Field mustard cytosol 85.67 85.37
CDY20301 Canola cytosol 85.32 84.75
CDY20302 Canola cytosol 76.11 84.47
AT4G31020.2 Thale cress cytosol 81.91 81.63
VIT_11s0149g00410.t01 Wine grape cytosol 56.31 79.71
KRH20089 Soybean cytosol 76.45 76.45
CDY46139 Canola cytosol 64.16 74.6
Solyc07g005130.2.1 Tomato cytosol 74.74 74.24
PGSC0003DMT400008297 Potato cytosol 74.74 74.24
HORVU6Hr1G085730.5 Barley mitochondrion 62.46 72.91
GSMUA_Achr9P13240_001 Banana cytosol 72.35 71.86
TraesCS6A01G360000.1 Wheat cytosol 67.24 71.38
TraesCS6D01G343000.1 Wheat cytosol 67.58 71.22
Os02t0796600-01 Rice cytosol 64.16 71.21
GSMUA_Achr5P04500_001 Banana cytosol 71.67 71.19
TraesCS6B01G392900.1 Wheat cytosol 67.24 70.86
VIT_11s0206g00050.t01 Wine grape cytosol 57.68 70.42
KRH12940 Soybean cytosol 70.65 69.7
GSMUA_Achr11P... Banana cytosol 69.28 68.81
GSMUA_Achr3P04580_001 Banana cytosol 68.94 68.47
KXG31273 Sorghum plastid 67.58 65.13
AT1G66900.1 Thale cress cytosol 54.61 58.82
AT5G38220.1 Thale cress cytosol 58.02 50.6
AT3G01690.1 Thale cress cytosol, plastid 59.39 48.2
AT4G24760.1 Thale cress cytosol, nucleus, plastid 58.7 47.12
AT5G14390.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 58.02 46.07
AT1G13610.1 Thale cress plastid 54.61 44.69
AT3G30380.1 Thale cress cytosol 60.75 44.61
AT1G32190.1 Thale cress plastid 57.0 39.57
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.2EntrezGene:816968UniProt:A0A1P8B0J4InterPro:AB_hydrolaseProteinID:AEC07562.1
ProteinID:ANM62411.1ArrayExpress:AT2G24320EnsemblPlantsGene:AT2G24320RefSeq:AT2G24320TAIR:AT2G24320RefSeq:AT2G24320-TAIR-G
EnsemblPlants:AT2G24320.2Unigene:At.52890EMBL:DQ446562GO:GO:0003674GO:GO:0003824GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008236GO:GO:0016787GO:GO:0019538InterPro:IPR029058
RefSeq:NP_001324569.1RefSeq:NP_180009.2PANTHER:PTHR12277PANTHER:PTHR12277:SF118SUPFAM:SSF53474UniParc:UPI0008491A5D
SEG:seg:::::
Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT2G24320]
Coordinates
chr2:-:10345659..10347053
Molecular Weight (calculated)
33558.7 Da
IEP (calculated)
9.534
GRAVY (calculated)
-0.417
Length
293 amino acids
Sequence
(BLAST)
001: MGNVTSNMAA KFAFFPPPPT YDVGKDEETG KLMFTGITPE KSMDVHQLTT KSGNKVIATF WKHPFSRFTL LYSHGNAADL GQMVDLFIEL RAHLRVNIMS
101: YDYSGYGAST GKPTELNTYY DIEAVYNCLR TEYGIMQEEM ILYGQSVGSG PTLHLASRVK RLRGIVLHSA ILSGLRVLYP VKMTFWFDMY KNIDKIRHVT
201: CPVLVIHGTK DDIVNMSHGK RLWELAKDKY DPLWVKGGGH CNLETYPEYI KHMRKFMNAM EKLALNNPPN KQQNDEPSIK ETKQNRCLRF SKR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.