Factsheet for GSMUA_Achr3P04580_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P13240_001	Banana	cytosol	89.15	89.15
GSMUA_Achr5P04500_001	Banana	cytosol	88.14	88.14
GSMUA_Achr11P...	Banana	cytosol	84.41	84.41
VIT_11s0149g00410.t01	Wine grape	cytosol	54.92	78.26
HORVU6Hr1G085730.5	Barley	mitochondrion	66.1	77.69
TraesCS6A01G360000.1	Wheat	cytosol	72.2	77.17
TraesCS6D01G343000.1	Wheat	cytosol	72.2	76.62
TraesCS6B01G392900.1	Wheat	cytosol	72.2	76.62
Os02t0796600-01	Rice	cytosol	68.14	76.14
KRH12940	Soybean	cytosol	76.27	75.76
KRH20089	Soybean	cytosol	74.92	75.43
Bra024028.1-P	Field mustard	cytosol	73.56	73.81
KXG31273	Sorghum	plastid	75.93	73.68
CDY13406	Canola	cytosol	73.22	73.47
CDY28238	Canola	cytosol	72.88	73.13
Bra011242.1-P	Field mustard	cytosol	72.88	73.13
CDX72285	Canola	cytosol	72.54	72.79
CDX68717	Canola	cytosol	72.54	72.79
PGSC0003DMT400008297	Potato	cytosol	72.54	72.54
Solyc07g005130.2.1	Tomato	cytosol	72.54	72.54
AT4G31020.2	Thale cress	cytosol	72.2	72.45
CDY51485	Canola	cytosol	72.2	72.45
CDY23273	Canola	cytosol	72.2	72.45
Bra010259.1-P	Field mustard	cytosol	72.2	72.45
CDY20302	Canola	cytosol	63.39	70.83
CDY55247	Canola	cytosol	70.51	70.75
CDY34778	Canola	cytosol	70.51	70.75
Bra007861.1-P	Field mustard	cytosol	70.51	70.75
VIT_11s0206g00050.t01	Wine grape	cytosol	56.61	69.58
Bra032105.1-P	Field mustard	cytosol	68.81	69.05
AT2G24320.2	Thale cress	cytosol	68.47	68.94
CDY20301	Canola	cytosol	68.47	68.47
CDY46139	Canola	cytosol	53.9	63.1
GSMUA_Achr9P22720_001	Banana	plastid	19.32	55.88
GSMUA_Achr1P06250_001	Banana	plastid	58.98	51.63
GSMUA_Achr8P17940_001	Banana	plastid	60.0	51.6
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	59.32	51.32
GSMUA_Achr10P...	Banana	plastid	57.97	48.31
GSMUA_Achr3P17130_001	Banana	plastid	59.32	47.68
GSMUA_Achr9P02010_001	Banana	plastid	58.64	47.14
GSMUA_Achr9P07620_001	Banana	plastid	57.63	46.2
GSMUA_Achr8P28640_001	Banana	plastid	56.61	45.5
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	58.98	45.19
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	42.37	45.13
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	26.44	40.84
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	42.71	38.53

Protein Annotations

EnsemblPlants:GSMUA_Achr3P04580_001	EnsemblPlants:GSMUA_Achr3T04580_001	EnsemblPlantsGene:GSMUA_Achr3G04580_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474
UniParc:UPI000295D600	UniProt:M0SBS6	MapMan:35.2	:	:	:

Description

Putative Abhydrolase domain-containing protein FAM108B1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G04580_001]

Coordinates

chr3:+:2955943..2959448

Molecular Weight (calculated)

33427.2 Da

IEP (calculated)

9.234

GRAVY (calculated)

-0.280

Length

295 amino acids

Sequence
(BLAST)

001: MGNVTSSVAA RFAFFPPEPA TYEVFRERGG EGRLCLSGLP PENNVEVHLV ETRAGNRVVA TFWRHPNARF TLLYSHGNAA DLGQMFDLFL RLRAHLRVNI
101: MSYDYSGYGG STGKPSEFNT YYDIEAVHDC LKKEYGIRQE DLILYGQSVG SGPTLHLATQ LQGLRGVVLH GAILSGIRVL YPVKVTFWFD IFKNINKIQQ
201: VDCPVLVIHG TADGIVEWTH GKRLWELSKE KYDPLWIKGG GHCNLEAYPE YIRHLRKFIS AMEKLPLVRQ EKQSSVPTST ITESKHNKCL RFGKR

Best Arabidopsis Sequence Match ( AT4G31020.2 )
(BLAST)

001: MGNVTSNVAA KFAFFPPEPA TYGVTKDDET GKLVFAGVSA DKNVEVHQLT TKSGNKVVAT FWRHPFARFT LLYSHGNAAD LGQMVELFIE LRAHLRVNIM
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84JV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.