Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20301 | Canola | cytosol | 97.73 | 87.46 |
| CDY55247 | Canola | cytosol | 91.67 | 82.31 |
| CDY34778 | Canola | cytosol | 90.91 | 81.63 |
| VIT_11s0149g00410.t01 | Wine grape | cytosol | 60.98 | 77.78 |
| AT2G24320.2 | Thale cress | cytosol | 84.47 | 76.11 |
| CDY28238 | Canola | cytosol | 83.33 | 74.83 |
| CDX68717 | Canola | cytosol | 82.95 | 74.49 |
| CDX72285 | Canola | cytosol | 82.58 | 74.15 |
| CDY13406 | Canola | cytosol | 82.58 | 74.15 |
| CDY51485 | Canola | cytosol | 82.2 | 73.81 |
| CDY46139 | Canola | cytosol | 70.08 | 73.41 |
| CDY23273 | Canola | cytosol | 81.06 | 72.79 |
| VIT_11s0206g00050.t01 | Wine grape | cytosol | 62.5 | 68.75 |
| KRH20089 | Soybean | cytosol | 75.76 | 68.26 |
| TraesCS6A01G360000.1 | Wheat | cytosol | 70.08 | 67.03 |
| TraesCS6D01G343000.1 | Wheat | cytosol | 70.45 | 66.91 |
| TraesCS6B01G392900.1 | Wheat | cytosol | 70.45 | 66.91 |
| Solyc07g005130.2.1 | Tomato | cytosol | 74.24 | 66.44 |
| PGSC0003DMT400008297 | Potato | cytosol | 74.24 | 66.44 |
| GSMUA_Achr5P04500_001 | Banana | cytosol | 73.86 | 66.1 |
| KRH12940 | Soybean | cytosol | 73.48 | 65.32 |
| GSMUA_Achr9P13240_001 | Banana | cytosol | 72.73 | 65.08 |
| HORVU6Hr1G085730.5 | Barley | mitochondrion | 61.74 | 64.94 |
| GSMUA_Achr11P... | Banana | cytosol | 71.21 | 63.73 |
| Os02t0796600-01 | Rice | cytosol | 63.64 | 63.64 |
| GSMUA_Achr3P04580_001 | Banana | cytosol | 70.83 | 63.39 |
| KXG31273 | Sorghum | plastid | 69.32 | 60.2 |
| CDY37505 | Canola | cytosol, extracellular | 15.15 | 59.7 |
| CDY31930 | Canola | cytosol | 14.02 | 57.81 |
| CDY37504 | Canola | cytosol | 16.29 | 56.58 |
| CDX91066 | Canola | plastid | 62.88 | 50.61 |
| CDY27016 | Canola | plastid | 63.26 | 48.83 |
| CDX77081 | Canola | plastid | 39.02 | 48.82 |
| CDY51065 | Canola | plastid | 63.26 | 48.55 |
| CDY32850 | Canola | cytosol | 61.36 | 47.09 |
| CDY35552 | Canola | plastid | 61.74 | 46.7 |
| CDX69584 | Canola | endoplasmic reticulum | 64.39 | 45.95 |
| CDY09851 | Canola | plastid | 64.02 | 45.68 |
| CDY28668 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 61.36 | 44.88 |
| CDY28862 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 61.36 | 44.88 |
| CDX86348 | Canola | cytosol, nucleus, plastid | 64.77 | 44.76 |
| CDX85290 | Canola | cytosol, nucleus, plastid | 64.39 | 44.5 |
| CDY35777 | Canola | cytosol | 63.26 | 44.3 |
| CDY03421 | Canola | cytosol | 60.23 | 44.29 |
| CDY34308 | Canola | cytosol | 60.23 | 43.44 |
| CDX98113 | Canola | plastid | 59.85 | 43.41 |
| CDY56180 | Canola | plastid | 59.09 | 42.98 |
| CDX85599 | Canola | cytosol | 40.53 | 41.0 |
| CDY22593 | Canola | plastid | 60.61 | 38.93 |
| CDY12257 | Canola | plastid | 60.61 | 38.93 |
| CDY43012 | Canola | plastid | 60.98 | 37.35 |
| CDX92650 | Canola | cytosol | 60.98 | 37.1 |
| CDY53272 | Canola | plastid | 19.32 | 32.48 |
| CDY11031 | Canola | cytosol, plastid | 27.27 | 30.13 |
| CDY45906 | Canola | cytosol | 20.08 | 23.77 |
Protein Annotations
| EnsemblPlants:CDY20302 | EnsemblPlantsGene:GSBRNA2T00012231001 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 |
| PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | PFAM:PF12146 | ProteinID:CDY20302 | ProteinID:CDY20302.1 | SUPFAM:SSF53474 |
| UniParc:UPI0004EDE05B | UniProt:A0A078G5R9 | MapMan:35.2 | : | : | : |
Description
BnaC04g36540DBnaC04g36540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5R9]
Coordinates
chrLK032105:-:464551..465768
Molecular Weight (calculated)
29916.2 Da
IEP (calculated)
9.712
GRAVY (calculated)
-0.285
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNVTSNVAA KLAFFPPSPA TYGVSKDEET GKLMFTGVTP EKSMVVHQIT TKSGNKVVAT FWKDPFARFT LIYSHGNAAD LGQMVELFIE LRAHLRVNVM
101: SYDYSGYGAS TGKPSEVNTY HDIEAVYNCL RSEYGIKQEE MVLYGQSVGS GPTLYLASRL KRLRGVVLHS AILSGIRVLY PVKMTFWFDI YKNIERIRHV
201: TCPVLVIHGT KDEVVNMSHG KKLWEISKDK YDPLWVKGGG HCNLESYPEY IKHLRKRRAK HYQN
101: SYDYSGYGAS TGKPSEVNTY HDIEAVYNCL RSEYGIKQEE MVLYGQSVGS GPTLYLASRL KRLRGVVLHS AILSGIRVLY PVKMTFWFDI YKNIERIRHV
201: TCPVLVIHGT KDEVVNMSHG KKLWEISKDK YDPLWVKGGG HCNLESYPEY IKHLRKRRAK HYQN
001: MAAKFAFFPP PPTYDVGKDE ETGKLMFTGI TPEKSMDVHQ LTTKSGNKVI ATFWKHPFSR FTLLYSHGNA ADLGQMVDLF IELRAHLRVN IMSYDYSGYG
101: ASTGKPTELN TYYDIEAVYN CLRTEYGIMQ EEMILYGQSV GSGPTLHLAS RVKRLRGIVL HSAILSGLRV LYPVKMTFWF DMYKNIDKIR HVTCPVLVIH
201: GTKDDIVNMS HGKRLWELAK DKYDPLWVKG GGHCNLETYP EYIKHMRKFM NAMEKLALNN PPNKQQNDEP SIKETKQNRC LRFSKR
101: ASTGKPTELN TYYDIEAVYN CLRTEYGIMQ EEMILYGQSV GSGPTLHLAS RVKRLRGIVL HSAILSGLRV LYPVKMTFWF DMYKNIDKIR HVTCPVLVIH
201: GTKDDIVNMS HGKRLWELAK DKYDPLWVKG GGHCNLETYP EYIKHMRKFM NAMEKLALNN PPNKQQNDEP SIKETKQNRC LRFSKR
Arabidopsis Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT2G24320]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.