CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G14390.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	89.94	79.95
CDY09851	Canola	plastid	89.94	79.73
CDX69584	Canola	endoplasmic reticulum	89.63	79.46
CDX85599	Canola	cytosol	62.2	78.16
CDY37505	Canola	cytosol, extracellular	15.24	74.63
CDY32850	Canola	cytosol	76.22	72.67
CDY37504	Canola	cytosol	16.77	72.37
CDY31930	Canola	cytosol	14.02	71.88
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	79.57	70.92
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	77.44	70.36
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	77.44	70.36
KRH07089	Soybean	cytosol	77.74	69.29
Solyc02g067920.2.1	Tomato	cytosol	78.05	69.19
PGSC0003DMT400017818	Potato	cytosol	77.13	68.19
KRG93968	Soybean	cytosol	76.22	68.12
KRH58237	Soybean	cytosol	75.91	67.85
CDY03421	Canola	cytosol	72.56	66.3
GSMUA_Achr9P02010_001	Banana	plastid	73.17	65.4
CDY34308	Canola	cytosol	72.56	65.03
CDX77081	Canola	plastid	41.46	64.45
GSMUA_Achr3P17130_001	Banana	plastid	71.04	63.49
CDY20302	Canola	cytosol	50.61	62.88
GSMUA_Achr8P28640_001	Banana	plastid	69.82	62.4
GSMUA_Achr9P07620_001	Banana	plastid	68.9	61.41
CDY51485	Canola	cytosol	54.57	60.88
CDY23273	Canola	cytosol	53.66	59.86
CDX72285	Canola	cytosol	53.66	59.86
CDX68717	Canola	cytosol	53.35	59.52
CDY28238	Canola	cytosol	53.35	59.52
CDY13406	Canola	cytosol	53.35	59.52
CDY27016	Canola	plastid	61.89	59.36
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	66.16	59.13
CDY51065	Canola	plastid	61.59	58.72
CDY55247	Canola	cytosol	52.13	58.16
CDY34778	Canola	cytosol	52.13	58.16
CDY20301	Canola	cytosol	52.13	57.97
Zm00001d030601_P001	Maize	plastid	64.33	57.49
Os12t0286600-01	Rice	cytosol, plastid	65.85	57.29
CDY46139	Canola	cytosol	42.99	55.95
CDX86348	Canola	cytosol, nucleus, plastid	62.8	53.93
CDX92650	Canola	cytosol	71.04	53.69
CDX85290	Canola	cytosol, nucleus, plastid	62.5	53.66
CDY35777	Canola	cytosol	60.98	53.05
CDX98113	Canola	plastid	58.54	52.75
CDY56180	Canola	plastid	58.23	52.62
CDY11031	Canola	cytosol, plastid	36.28	49.79
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	47.56	47.71
CDY35552	Canola	plastid	47.87	44.99
CDY53272	Canola	plastid	19.21	40.13
CDY22593	Canola	plastid	47.56	37.96
CDY12257	Canola	plastid	47.26	37.71
CDY45906	Canola	cytosol	24.7	36.32
CDY43012	Canola	plastid	47.56	36.19

Protein Annotations

EnsemblPlants:CDX91066	EnsemblPlantsGene:GSBRNA2T00151838001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	ProteinID:CDX91066	ProteinID:CDX91066.1	SUPFAM:SSF53474
UniParc:UPI0004EE26C0	MapMan:35.2	:	:	:	:

Description

BnaC02g05310D

Coordinates

chrLK031865:+:614315..616685

Molecular Weight (calculated)

36969.1 Da

IEP (calculated)

7.285

GRAVY (calculated)

-0.458

Length

328 amino acids

Sequence
(BLAST)

001: MGGVTSSIAA KLAFCPPSPS SYRLVSDEVT GLLLMNPFPH RENVEVLKLP TRKGTEIVAV HVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSESHTY ADIEAAYKCL EESYGTKQED VILYGQSVGS GPTLDLAARL PQLRAAVLHS PILSGLRVMY PVKKTYWFDI YKNIDKITLV
201: NCPVLVIHGT SDEVVDCSHG KQLWELSKEK YEPLWLEGGS HCDLEHYPEY IKHLKKFMTA VERPLSSRES TCHSENQSSD VEMPRQSHLD RSRRSVDLHD
301: KARKSVGHNH QIERGRKSVD RMDRVRSE

Best Arabidopsis Sequence Match ( AT5G14390.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPS SYKLVYDELT GLLLMNPFPH RENVEILKLP TRRGTEIVAM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHHTY ADIEAAYKCL EETYGAKQED IILYGQSVGS GPTLDLAARL PQLRAAVLHS PILSGLRVMY PVKKTYWFDI FKNIDKIPLV
201: NCPVLVIHGT CDEVVDCSHG KQLWELSKEK YEPLWLEGGN HCDLEHYPEY IKHLKKFITT VERDLSSRAS TAQLEKQSSD LEMPRQSVDR REKPRQSVDK
301: REKEKPPKGP SKKSKLRITF EQHLDRTRRS VDFHEKARKS VDHHQHHQNH HQIERGRKSV DRLDRVRSE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LY90]
SUBAcon: [extracellular,nucleus,cytosol,golgi,plasma membrane,vacuole,endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.